Official Symbol

Cldn20provided by MGI

Official Full Name

claudin 20provided by MGI

Primary Source

MGI:3646757

Gene type

protein coding

RefSeq status

PROVISIONAL

Organism

Mus musculus

Lineage

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus

Also known as

EG621628; Cldn20

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chromosome: 17; Location: 17 A1See Cldn20 in MapViewer

Preferred Names

claudin 20

Names

claudin 20

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001101560.1 → NP_001095030.1  claudin 20

   Source sequence(s)

   CH466633

   Conserved Domains (1) summary

   pfam00822
   Location:5 – 181
   Blast Score: 189

   PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference assembly (C57BL/6J)

Genomic

1. NC_000083.5

   Range

   3532553..3533212

   Download

   GenBank FASTA Sequence Viewer (Graphics)

2. NT_039636.7

   Range

   532553..533212

   Download

   GenBank FASTA Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_888581.1 → XP_893674.1  

   Conserved Domains (1) summary

   pfam00822
   Location:5 – 181
   Blast Score: 189

   PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

Alternate assembly (based on Celera)

Genomic

1. AC_000039.1

   Range

   4067360..4068019

   Download

   GenBank FASTA Sequence Viewer (Graphics)

2. NW_001030590.1

   Range

   528965..529624

   Download

   GenBank FASTA Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_904536.1 → XP_909629.1  

   Conserved Domains (1) summary

   pfam00822
   Location:5 – 181
   Blast Score: 189

   PMP22_Claudin; PMP-22/EMP/MP20/Claudin family