1: USP25 ubiquitin specific peptidase 25 [ Homo sapiens ]

GeneID: 29761 updated 4-Dec-2009

[Top][Help]Summary

Official Symbol
USP25provided by HGNC
Official Full Name
ubiquitin specific peptidase 25provided by HGNC
Primary Source
HGNC:12624
See related
Ensembl:ENSG00000155313; HPRD:05296; MIM:604736
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
USP21; USP25
Summary
Ubiquitin (MIM 191339) is a highly conserved 76-amino acid protein involved in regulation of intracellular protein breakdown, cell cycle regulation, and stress response. Ubiquitin is released from degraded proteins by disassembly of the polyubiquitin chains, which is mediated by ubiquitin-specific proteases (USPs), such as USP25 (Valero et al., 1999 [PubMed 10644437]).[supplied by OMIM]

[Top][Help]Genomic regions, transcripts, and products

(plus) Go to reference sequence detailsTry our new Sequence Viewer


[Top][Help]Genomic context

chromosome: 21; Location: 21q11.2See USP25 in MapViewer

[Top][Help]Bibliography

Related Articles in PubMed

GeneRIFs: Gene References Into Function What's a GeneRIF?

PubMed 1. Data show that USP25m is regulated through alternative conjugation of ubiquitin (activating) or SUMO (inhibiting) to the same lysine residue (K99), which may promote the interaction with distinct intramolecular regulatory domains.
PubMed 2. downregulation of USP25 gene in human lung cancer
PubMed 3. Seven amino acids in the SIM of USP25 are sufficient for SUMO2/3-specific binding and conjugation
PubMed 4. characterization of alternatively spliced products and tissue-specific isoforms

[Top][Help]General gene information

Markers

G34705(e-PCR)
Links: UniSTS:56119
SHGC-52068(e-PCR)
Links: UniSTS:5951
G18012(e-PCR)
Links: UniSTS:4700
D21S382(e-PCR)
Links: UniSTS:147851
RH36201(e-PCR)
Links: UniSTS:87504
PMC57798P1(e-PCR)
Links: UniSTS:273366
USP25__5042(e-PCR)
Links: UniSTS:464099
D21S1830(e-PCR)
Links: UniSTS:60905
G19905(e-PCR)
Links: UniSTS:5619
A002B43(e-PCR)
Links: UniSTS:5620
D21S189(e-PCR)
Links: UniSTS:148731

Homology

Homologs of the USP25 gene The USP25 gene is conserved in chimpanzee, dog, cow, mouse, rat, chicken, and zebrafish.


Map Viewer (Mouse, Rat)

[Top][Help]General protein information

Preferred Names
ubiquitin specific peptidase 25
Names
ubiquitin specific peptidase 25
deubiquitinating enzyme 25
ubiquitin thiolesterase 25
ubiquitin specific protease 25
ubiquitin carboxyl-terminal hydrolase 25
ubiquitin-specific processing protease 25
NP_037528.3
EC 3.1.2.15

[Top][Help]NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

mRNA and Protein(s)

  1. NM_013396.3NP_037528.3  ubiquitin specific peptidase 25

    Source sequence(s)
    AF134213,AF170562,BI256537,BQ215557
    Consensus CDS
    CCDS33515.1
    UniProtKB/Swiss-Prot
    Q9UHP3
    Related Ensembl
    ENSP00000285679, ENST00000285679
    Conserved Domains (2) summary
    cd02665
    Location:258404
    Blast Score: 575
    Peptidase_C19I; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl...
    cl02553
    Location:168297
    Blast Score: 148
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly...

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Genome Reference Consortium Human Build 37 (GRCh37), Primary_Assembly

Genomic

  1. NC_000021.8

    Range
    17102495..17252376
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NT_011512.11 

    Range
    2764366..2914247
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (Celera)

Genomic

  1. AC_000064.1

    Range
    2272739..2422617
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_927384.1 

    Range
    1757862..1907740
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (HuRef)

Genomic

  1. AC_000153.1

    Range
    2481854..2631588
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_001838706.1 

    Range
    1911268..2061002
    Download
    GenBank FASTA Sequence Viewer (Graphics)

[Top][Help]Related Sequences

  Nucleotide   Protein
  genomic   AJ010597.1  (19419..105998)   None
  genomic   AJ010598.1  (12050..75351)   None
  genomic   CH471079.2   EAX10041.1
       EAX10042.1
       EAX10043.1
       EAX10044.1
       EAX10045.1
  mRNA   AF134213.1   AAF24998.1
  mRNA   AF170562.1   AAF32263.1
  mRNA   AK022447.1   BAB14037.1
  mRNA   AK022574.1   BAB14107.1
  mRNA   AK094083.1   None
  mRNA   BC015930.1   AAH15930.1
  mRNA   BC018686.1   None
  mRNA   BC075792.1   AAH75792.1
  mRNA   BI256537.1   None
  mRNA   BQ215557.1   None
  mRNA   CR600261.1   None
  mRNA   FJ763652.1   ACN76567.1
Protein Accession   Links
Q96B65   GenPept   UniProtKB/TrEMBL:Q96B65
Q9HA22   GenPept   UniProtKB/TrEMBL:Q9HA22
Q9UHP3.3   GenPept   UniProtKB/Swiss-Prot:Q9UHP3

[Top][Help]Additional Links

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