1: Hba-a1 hemoglobin alpha, adult chain 1 [ Mus musculus ]

GeneID: 15122 updated 3-Dec-2009

[Top][Help]Summary

Official Symbol
Hba-a1provided by MGI
Official Full Name
hemoglobin alpha, adult chain 1provided by MGI
Primary Source
MGI:96015
See related
Ensembl:ENSMUSG00000069919
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus
Also known as
Hba1; Hbat1; Hba-a1

[Top][Help]Genomic regions, transcripts, and products

(plus) Go to reference sequence detailsTry our new Sequence Viewer


[Top][Help]Genomic context

chromosome: 11; Location: 11 A4; 11 16.0 cMSee Hba-a1 in MapViewer

[Top][Help]Bibliography

Related Articles in PubMed

GeneRIFs: Gene References Into Function What's a GeneRIF?

PubMed 1. These data suggest that CP2b potentiate erythroid cell-specific alpha-globin expression by recruiting CP2c into the nucleus.
PubMed 2. It is suggested that the higher expression of hemoglobin alpha1 in the brain may be associated with ECM and could be a source of excess heme, a molecule that is considered to trigger the pathogenesis of cerebral malaria.
PubMed 3. The objective of this study was to test whether amino acid differences among triplicated alpha-globin paralogs are attributable to a relaxation of purifying selection or to a history of positive selection.
PubMed 4. Allosteric effects of chloride ions at the interfaces between the alphabeta dimers.

[Top][Help]Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

[Top][Help]General gene information

Markers

Hba-a1(e-PCR), detects polymorphism
Links: UniSTS:470555
Hba-a1(e-PCR), detects polymorphism
Links: UniSTS:525964
Hba-a1(e-PCR), detects polymorphism
Links: UniSTS:516521
Hba-a1(e-PCR), detects polymorphism
Links: UniSTS:143317
Hba-a1(e-PCR), detects polymorphism
Links: UniSTS:143318
Hba-a1(e-PCR), detects polymorphism
Links: UniSTS:465391

Homology

Homologs of the Hba-a1 gene The Hba-a1 gene is conserved in human, cow, rat, and chicken.

Gene Ontology Provided by GOA

Function Evidence
heme binding IEA   
iron ion binding IEA   
metal ion binding IEA   
oxygen binding IEA   
oxygen transporter activity IEA   
Component Evidence
hemoglobin complex IEA   

[Top][Help]General protein information

Preferred Names
hemoglobin alpha 1 chain
Names
hemoglobin alpha 1 chain
alpha-globin
alpha 1 globin
alpha globin 1
OTTMUSP00000005553
haemaglobin alpha 1

[Top][Help]NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

mRNA and Protein(s)

  1. NM_008218.2NP_032244.2  hemoglobin alpha 1 chain

    Source sequence(s)
    AK011055,BC043020
    Consensus CDS
    CCDS24523.1
    UniProtKB/TrEMBL
    Q91VB8
    Related Ensembl
    ENSMUSP00000090897, ENSMUST00000093209
    Conserved Domains (1) summary
    cd01040
    Location:4137
    Blast Score: 268
    globin; Globins are heme proteins, which bind and transport oxygen. This family summarizes a diverse set of homologous protein domains, including: (1) tetrameric vertebrate hemoglobins, which are the major protein component of erythrocytes and transport oxygen...

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly (C57BL/6J)

Genomic

  1. NC_000077.5

    Range
    32183673..32184492
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NT_039515.6 

    Range
    29183673..29184492
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (unknown)

Genomic

  1. NT_039531.1 Alternate assembly (unknown)

    Range
    123569..124388
    Download
    GenBank FASTA Sequence Viewer (Graphics)

[Top][Help]Related Sequences

  Nucleotide   Protein Strain
  genomic   AL662780.20   CAM22512.1
       CAM22514.1
  genomic   AY016021.1   AAL32371.1
  genomic   EF605415.1   ABU63223.1
  genomic   EF605472.1   ABU54054.1
  genomic   M10703.1   AAA37782.2   BALB/c
  genomic   V00714.1   CAA24095.1
  genomic   X05379.1   None
  mRNA   AK003077.1   BAB22552.1   C57BL/6J
  mRNA   AK010923.1   BAB27269.1   C57BL/6J
  mRNA   AK010927.1   BAB27272.1   C57BL/6J
  mRNA   AK010933.1   BAB27277.1   C57BL/6J
  mRNA   AK010937.1   BAB27279.1   C57BL/6J
  mRNA   AK010987.1   BAB27307.1   C57BL/6J
  mRNA   AK011018.1   BAB27336.1   C57BL/6J
  mRNA   AK011023.1   BAB27340.1   C57BL/6J
  mRNA   AK011025.1   BAB27342.1   C57BL/6J
  mRNA   AK011028.1   BAB27344.1   C57BL/6J
  mRNA   AK011055.1   BAB27364.1   C57BL/6J
  mRNA   AK011056.1   None   C57BL/6J
  mRNA   AK011063.1   BAB27370.1   C57BL/6J
  mRNA   AK011076.1   BAB27381.1   C57BL/6J
  mRNA   AK011116.1   None   C57BL/6J
  mRNA   AK012329.1   BAB28166.1   C57BL/6J
  mRNA   AK012755.1   BAB28446.1   C57BL/6J
  mRNA   AK171893.1   BAE42724.1   NOD
  mRNA   BC043020.1   AAH43020.1   C57BL/6
  mRNA   L75940.1   AAB59723.1   C3H
Protein Accession   Links
P01942.2   GenPept   UniProtKB/Swiss-Prot:P01942
Q61287   GenPept   UniProtKB/TrEMBL:Q61287
Q91VB8   GenPept   UniProtKB/TrEMBL:Q91VB8
Q9CY06   GenPept   UniProtKB/TrEMBL:Q9CY06
Q9CY10   GenPept   UniProtKB/TrEMBL:Q9CY10

[Top][Help]Additional Links

Gene LinkOut

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