1: C20orf54 chromosome 20 open reading frame 54 [ Homo sapiens ]

GeneID: 113278 updated 3-Dec-2009

[Top][Help]Summary

Official Symbol
C20orf54provided by HGNC
Official Full Name
chromosome 20 open reading frame 54provided by HGNC
Primary Source
HGNC:16187
See related
Ensembl:ENSG00000101276; HPRD:09843
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MGC10698; bA371L19.1; C20orf54

[Top][Help]Genomic regions, transcripts, and products

(minus strand) Go to reference sequence detailsTry our new Sequence Viewer


[Top][Help]Genomic context

chromosome: 20; Location: 20p13See C20orf54 in MapViewer

[Top][Help]Bibliography

Related Articles in PubMed

[Top][Help]General gene information

Markers

RH80917(e-PCR)
Links: UniSTS:83736
RH102145(e-PCR)
Links: UniSTS:96479

Homology

Homologs of the C20orf54 gene The C20orf54 gene is conserved in chimpanzee, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, and C.elegans.


Map Viewer (Mouse, Rat)

Gene Ontology Provided by GOA

Function Evidence
protein binding IEA   
Process Evidence
cellular response to heat IEA   
Component Evidence
integral to membrane IEA   
membrane IEA   

[Top][Help]General protein information

Preferred Names
hypothetical protein LOC113278
Names
hypothetical protein LOC113278

[Top][Help]NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

mRNA and Protein(s)

  1. NM_033409.3NP_212134.3  hypothetical protein LOC113278 precursor

    Source sequence(s)
    AI244952,AK074650,BC009750,DA302552,DA358731
    Consensus CDS
    CCDS13007.1
    UniProtKB/Swiss-Prot
    Q9NQ40
    Related Ensembl
    ENSP00000217254, ENST00000217254
    Conserved Domains (1) summary
    pfam06237
    Location:294395
    Blast Score: 346
    DUF1011; Protein of unknown function (DUF1011)

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Genome Reference Consortium Human Build 37 (GRCh37), Primary_Assembly

Genomic

  1. NC_000020.10

    Range
    740723..749227, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NT_011387.8 

    Range
    680723..689227, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (Celera)

Genomic

  1. AC_000063.1

    Range
    835488..844005, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_927317.1 

    Range
    692664..701181, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (HuRef)

Genomic

  1. AC_000152.1

    Range
    692136..700683, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_001838652.1 

    Range
    692136..700683, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)

[Top][Help]Related Sequences

  Nucleotide   Protein
  genomic   AL118502.38   CAH73077.2
       CAH73078.2
  genomic   CH471133.3   EAX10657.1
       EAX10658.1
       EAX10659.1
  mRNA   AI244952.1   None
  mRNA   AK074650.1   BAC11113.1
  mRNA   AK291706.1   BAF84395.1
  mRNA   BC009750.2   AAH09750.2
  mRNA   DA302552.1   None
  mRNA   DA358731.1   None
Protein Accession   Links
Q9NQ40.4   GenPept   UniProtKB/Swiss-Prot:Q9NQ40

[Top][Help]Additional Links

Gene LinkOut

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