1: Atp6v1h ATPase, H+ transporting, lysosomal V1 subunit H [ Mus musculus ]

GeneID: 108664 updated 3-Dec-2009

[Top][Help]Summary

Official Symbol
Atp6v1hprovided by MGI
Official Full Name
ATPase, H+ transporting, lysosomal V1 subunit Hprovided by MGI
Primary Source
MGI:1914864
See related
Ensembl:ENSMUSG00000033793
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus
Also known as
SFD; VMA13; CGI-11; SFDbeta; AU022349; MGC11985; SFDalpha; 0710001F19Rik; Atp6v1h

[Top][Help]Genomic regions, transcripts, and products

(plus) Go to reference sequence detailsTry our new Sequence Viewer


[Top][Help]Genomic context

chromosome: 1; Location: 1 A1See Atp6v1h in MapViewer

[Top][Help]Bibliography

Related Articles in PubMed

[Top][Help]Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

  • Gene trapped (1) 

[Top][Help]General gene information

Markers

AU022349(e-PCR)
Links: UniSTS:207123

Homology

Homologs of the Atp6v1h gene The Atp6v1h gene is conserved in human, chimpanzee, dog, cow, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, A.thaliana, rice, and P.falciparum.


Map Viewer (Human, Rat)

Pathways

KEGG pathway: Lysosome
04142
KEGG pathway: Metabolic pathways
01100
KEGG pathway: Oxidative phosphorylation
00190

[Top][Help]General protein information

Preferred Names
ATPase, H+ transporting, lysosomal V1 subunit H
Names
ATPase, H+ transporting, lysosomal V1 subunit H
V-ATPase H subunit
vacuolar ATPase subunit H
vacuolar proton pump H subunit
vacuolar ATP synthase subunit H
ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H

[Top][Help]NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

mRNA and Protein(s)

  1. NM_133826.4NP_598587.2  ATPase, H+ transporting, lysosomal V1 subunit H

    Source sequence(s)
    AC131067,AC157807
    Consensus CDS
    CCDS14808.1
    UniProtKB/Swiss-Prot
    Q8BVE3
    Related Ensembl
    ENSMUSP00000040756, ENSMUST00000044369
    Conserved Domains (1) summary
    cd00256
    Location:17465
    Blast Score: 1562
    VATPase_H; VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments. The...

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly (C57BL/6J)

Genomic

  1. NC_000067.5

    Range
    5073253..5152629
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NT_039169.7 

    Range
    2073253..2152629
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (based on Celera)

Genomic

  1. AC_000023.1

    Range
    5091063..5165860
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_001030649.1 

    Range
    2091063..2165860
    Download
    GenBank FASTA Sequence Viewer (Graphics)

[Top][Help]Related Sequences

  Nucleotide   Protein Strain
  genomic   AC131067.16  (19490..91217)   None
  genomic   AC157807.4  (157695..165343)   None
  genomic   CH466536.1   EDL14258.1   mixed
  mRNA   AK034165.1   None   C57BL/6J
  mRNA   AK078767.1   BAC37382.1   C57BL/6J
  mRNA   AK081492.1   None   C57BL/6J
  mRNA   AK135137.1   None   C57BL/6J
  mRNA   AK151659.1   BAE30587.1   C57BL/6J
  mRNA   AK152147.1   None   C57BL/6J
  mRNA   BC009154.1   AAH09154.1   FVB/N
Protein Accession   Links
Q3U9S9   GenPept   UniProtKB/TrEMBL:Q3U9S9
Q8BVE3.1   GenPept   UniProtKB/Swiss-Prot:Q8BVE3

[Top][Help]Additional Links

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