1: Hepacam2 HEPACAM family member 2 [ Mus musculus ]

GeneID: 101202 updated 3-Dec-2009

[Top][Help]Summary

Official Symbol
Hepacam2provided by MGI
Official Full Name
HEPACAM family member 2provided by MGI
Primary Source
MGI:2141520
See related
Ensembl:ENSMUSG00000044156
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus
Also known as
AI987662; Hepacam2

[Top][Help]Genomic regions, transcripts, and products

(minus strand) Go to reference sequence detailsTry our new Sequence Viewer


[Top][Help]Genomic context

chromosome: 6; Location: 6 A1See Hepacam2 in MapViewer

[Top][Help]Bibliography

Related Articles in PubMed

[Top][Help]General gene information

Markers

AI987662(e-PCR)
Links: UniSTS:165450
Hepacam2(e-PCR), detects polymorphism
Links: UniSTS:525496
NoName(e-PCR)
Links: UniSTS:488179

Homology

Homologs of the Hepacam2 gene The Hepacam2 gene is conserved in human, chimpanzee, dog, cow, rat, chicken, and zebrafish.


Map Viewer (Human, Rat)

Gene Ontology Provided by GOA

Component Evidence
integral to membrane IEA   
membrane IEA   

[Top][Help]General protein information

Preferred Names
HEPACAM family member 2
Names
HEPACAM family member 2

[Top][Help]NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

mRNA and Protein(s)

  1. NM_178899.5NP_849230.1  HEPACAM family member 2 precursor

    Source sequence(s)
    AC022453
    Consensus CDS
    CCDS39414.1
    UniProtKB/Swiss-Prot
    Q4VAH7
    Related Ensembl
    ENSMUSP00000058882, ENSMUST00000049985
    Conserved Domains (3) summary
    cd00931
    Location:160233
    Blast Score: 149
    IGcam; Immunoglobulin domain cell adhesion molecule (cam) subfamily; members are components of neural cell adhesion molecules (N-CAM L1), Fasciclin II and the insect immune protein Hemolin. The subfamily also includes receptor domains such as as the...
    pfam00047
    Location:165222
    Blast Score: 96
    ig; Immunoglobulin domain
    pfam07686
    Location:35143
    Blast Score: 93
    V-set; Immunoglobulin V-set domain

RefSeqs of Annotated Genomes: Build 37.1

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly (C57BL/6J)

Genomic

  1. NC_000072.5

    Range
    3407088..3444497, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NT_039340.7 

    Range
    407088..444497, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)

Alternate assembly (based on Celera)

Genomic

  1. AC_000028.1

    Range
    3614439..3652752, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)
  2. NW_001030802.1 

    Range
    345353..383666, complement
    Download
    GenBank FASTA Sequence Viewer (Graphics)

[Top][Help]Related Sequences

  Nucleotide   Protein Strain
  genomic   AC022453.5  (160229..197638)   None   C57BL/6J
  genomic   CH466533.2   EDL13995.1   mixed
       EDL13996.1   mixed
  mRNA   AK033728.1   BAC28450.1   C57BL/6J
  mRNA   AK050501.1   BAC34294.1   C57BL/6J
  mRNA   BC096374.1   AAH96374.1   FVB/N
Protein Accession   Links
Q4VAH7.1   GenPept   UniProtKB/Swiss-Prot:Q4VAH7

[Top][Help]Additional Links

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.