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    proY putative transporter ProY [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945050, updated on 11-Apr-2024

    Summary

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    Gene symbol
    proY
    Gene description
    putative transporter ProY
    Primary source
    ASAP:ABE-0001398
    Locus tag
    b0402
    See related
    ECOCYC:G6233
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0396; yajM
    Summary
    ProY is a probable proline transporter. [More information is available at EcoCyc: G6233].
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    Genomic context

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    Sequence:
    NC_000913.3 (420986..422359)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene sensor histidine kinase PhoR Neighboring gene branched chain amino acid transporter BrnQ Neighboring gene maltodextrin glucosidase Neighboring gene acyl carrier protein phosphodiesterase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multicopy suppression underpins metabolic evolvability. Patrick WM, et al. Mol Biol Evol, 2007 Dec. PMID 17884825, Free PMC Article
    2. A cryptic proline permease in Salmonella typhimurium. Liao MK, et al. Microbiology (Reading), 1997 Sep. PMID 9308174
    3. Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Zhang N, et al. Proteomics, 2007 Feb. PMID 17309111
    4. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    5. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables amino acid transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in amino acid transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in amino acid transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative transporter ProY

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      420986..422359
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414936.1 putative transporter ProY [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414936.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0H3PV75, A0A192CIL0, A0A5B9AFR3, A0A827XXX2, A0AA36KV47, B1LIT7, Q1RFD9
      Conserved Domains (1) summary
      PRK10580
      Location:1 → 455
      proY; putative proline-specific permease; Provisional
    Nucleotide Protein
    Heading Accession and Version

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