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    LPAT5 lysophosphatidyl acyltransferase 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821418, updated on 15-Feb-2024

    Summary

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    Gene symbol
    LPAT5
    Gene description
    lysophosphatidyl acyltransferase 5
    Primary source
    Araport:AT3G18850
    Locus tag
    AT3G18850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    lysophosphatidyl acyltransferase 5
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    Genomic context

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    See LPAT5 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (6499332..6501432, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene LOW protein: PPR containing-like protein Neighboring gene miscRNA Neighboring gene transducin family protein / WD-40 repeat family protein Neighboring gene Mitochondrial transcription termination factor family protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. LYSOPHOSPHATIDIC ACID ACYLTRANSFERASES 4 and 5 are involved in glycerolipid metabolism and nitrogen starvation response in Arabidopsis. Angkawijaya AE, et al. New Phytol, 2019 Oct. PMID 31211859
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713
    3. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. LPAT4 and LPAT5 may redundantly function in endoplasmic-reticulum-localized de novo glycerolipid biosynthesis for phospholipids and triacylglycerol.
      Title: LYSOPHOSPHATIDIC ACID ACYLTRANSFERASES 4 and 5 are involved in glycerolipid metabolism and nitrogen starvation response in Arabidopsis.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    Homology

    NM_001035647.3
    NM_001084714.1
    NM_001084715.1
    NM_001338361.1
    NM_112771.5
    NM_202606.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 1-acylglycerol-3-phosphate O-acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in CDP-diacylglycerol biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    lysophosphatidyl acyltransferase 5
    NP_001030724.2
    • lysophosphatidyl acyltransferase 5 (LPAT5); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 4 (TAIR:AT1G75020.2); Has 1763 Blast hits to 1758 proteins in 511 species: Archae - 0; Bacteria - 640; Metazoa - 539; Fungi - 189; Plants - 155; Viruses - 6; Other Eukaryotes - 234 (source: NCBI BLink).
    NP_001078183.1
    • lysophosphatidyl acyltransferase 5 (LPAT5); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 4 (TAIR:AT1G75020.2); Has 1767 Blast hits to 1762 proteins in 514 species: Archae - 0; Bacteria - 643; Metazoa - 539; Fungi - 190; Plants - 155; Viruses - 6; Other Eukaryotes - 234 (source: NCBI BLink).
    NP_001078184.1
    • lysophosphatidyl acyltransferase 5 (LPAT5); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 4 (TAIR:AT1G75020.2); Has 1643 Blast hits to 1638 proteins in 497 species: Archae - 0; Bacteria - 573; Metazoa - 538; Fungi - 198; Plants - 153; Viruses - 6; Other Eukaryotes - 175 (source: NCBI BLink).
    NP_188515.1
    • lysophosphatidyl acyltransferase 5 (LPAT5); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 4 (TAIR:AT1G75020.2); Has 1763 Blast hits to 1758 proteins in 511 species: Archae - 0; Bacteria - 640; Metazoa - 539; Fungi - 189; Plants - 155; Viruses - 6; Other Eukaryotes - 234 (source: NCBI BLink).
    NP_974335.1
    • lysophosphatidyl acyltransferase 5 (LPAT5); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: lysophosphatidyl acyltransferase 4 (TAIR:AT1G75020.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      6499332..6501432 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001035647.3 → NP_001030724.2  lysophosphatidyl acyltransferase 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030724.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q2V3U6, Q9LHN4
      UniProtKB/TrEMBL
      A0A178VAY6, A0A654F9J8
      Conserved Domains (1) summary
      PLN02510
      Location:1 → 375
      PLN02510; probable 1-acyl-sn-glycerol-3-phosphate acyltransferase

    2. NM_202606.2 → NP_974335.1  lysophosphatidyl acyltransferase 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974335.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q2V3U6, Q9LHN4
      UniProtKB/TrEMBL
      A0A178VAY6, A0A654F9J8
      Conserved Domains (1) summary
      PLN02510
      Location:1 → 375
      PLN02510; probable 1-acyl-sn-glycerol-3-phosphate acyltransferase

    3. NM_112771.5 → NP_188515.1  lysophosphatidyl acyltransferase 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188515.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q2V3U6, Q9LHN4
      UniProtKB/TrEMBL
      A0A178VAY6, A0A654F9J8
      Conserved Domains (1) summary
      PLN02510
      Location:1 → 375
      PLN02510; probable 1-acyl-sn-glycerol-3-phosphate acyltransferase

    4. NM_001084715.1 → NP_001078184.1  lysophosphatidyl acyltransferase 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078184.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EJE0, F4J9W3
      Conserved Domains (3) summary
      cd07990
      Location:47 → 237
      LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
      PLN02510
      Location:1 → 352
      PLN02510; probable 1-acyl-sn-glycerol-3-phosphate acyltransferase
      pfam16076
      Location:228 → 292
      Acyltransf_C; Acyltransferase C-terminus

    5. NM_001338361.1 → NP_001326795.1  lysophosphatidyl acyltransferase 5 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LQD2

    6. NM_001084714.1 → NP_001078183.1  lysophosphatidyl acyltransferase 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078183.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q2V3U6, Q9LHN4
      UniProtKB/TrEMBL
      A0A178VAY6, A0A654F9J8
      Conserved Domains (1) summary
      PLN02510
      Location:1 → 375
      PLN02510; probable 1-acyl-sn-glycerol-3-phosphate acyltransferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LHN4.1

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