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    odr4 odr-4 GPCR localization factor homolog [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 779449, updated on 5-Mar-2024

    Summary

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    Official Symbol
    odr4provided by Xenbase
    Official Full Name
    odr-4 GPCR localization factor homologprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-964878
    See related
    Ensembl:ENSXETG00000017388
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    TTG1; odr-4; c1orf27
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (119690333..119712719, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (109309223..109326335, complement)

    Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene phospholipase A2 group IVA Neighboring gene prostaglandin-endoperoxide synthase 2 Neighboring gene phosducin Neighboring gene translocated promoter region, nuclear basket protein Neighboring gene proteoglycan 4 Neighboring gene hemicentin 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    protein odr-4 homolog
    Names
    Protein odr-4 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      119690333..119712719 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002933769.5 → XP_002933815.3  protein odr-4 homolog isoform X1

      UniProtKB/Swiss-Prot
      Q0VA36
      UniProtKB/TrEMBL
      F6RIS9
      Related
      ENSXETP00000037840.5, ENSXETT00000037840.5
      Conserved Domains (1) summary
      pfam14778
      Location:28 → 381
      ODR4-like; Olfactory receptor 4-like

    2. XM_018093649.2 → XP_017949138.2  protein odr-4 homolog isoform X3

      UniProtKB/Swiss-Prot
      Q0VA36
      UniProtKB/TrEMBL
      A0A8J0T0K6
      Conserved Domains (1) summary
      pfam14778
      Location:28 → 334
      ODR4-like; Olfactory receptor 4-like

    3. XM_004913765.4 → XP_004913822.2  protein odr-4 homolog isoform X1

      UniProtKB/Swiss-Prot
      Q0VA36
      UniProtKB/TrEMBL
      F6RIS9
      Conserved Domains (1) summary
      pfam14778
      Location:28 → 381
      ODR4-like; Olfactory receptor 4-like

    4. XM_004913766.4 → XP_004913823.2  protein odr-4 homolog isoform X2

      UniProtKB/Swiss-Prot
      Q0VA36
      UniProtKB/TrEMBL
      A0A8J0R2S8
      Related
      ENSXETP00000103012.1, ENSXETT00000116164.1
      Conserved Domains (1) summary
      pfam14778
      Location:28 → 381
      ODR4-like; Olfactory receptor 4-like
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0VA36.2 GenPept UniProtKB/Swiss-Prot:Q0VA36

    Gene LinkOut

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