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    ONECUT1 one cut homeobox 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 746173, updated on 29-Mar-2024

    Summary

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    Official Symbol
    ONECUT1provided by VGNC
    Official Full Name
    one cut homeobox 1provided by VGNC
    Primary source
    VGNC:VGNC:13414
    Locus tag
    CK820_G0008538
    See related
    Ensembl:ENSPTRG00000007090
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 15
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 16 NC_072414.2 (44735918..44775543, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 15 NC_072413.1 (44710783..44750408, complement)

    Chromosome 16 - NC_072414.2Genomic Context describing neighboring genes Neighboring gene atos homolog A Neighboring gene uncharacterized LOC107968626 Neighboring gene uncharacterized LOC107968625 Neighboring gene uncharacterized LOC104002306 Neighboring gene small ribosomal subunit protein uS2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hepatocyte nuclear factor 6
    Names
    one cut domain, family member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072414.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      44735918..44775543 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001170549.5 → XP_001170549.2  hepatocyte nuclear factor 6

      UniProtKB/TrEMBL
      A0A2I3SA00, A0A2J8NSN2, A0A6D2X185
      Related
      ENSPTRP00000073859.1
      Conserved Domains (2) summary
      smart00389
      Location:385 → 440
      HOX; Homeodomain
      pfam02376
      Location:288 → 362
      CUT; CUT domain

    RNA

    1. XR_008539314.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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