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    P3H4 prolyl 3-hydroxylase family member 4 (inactive) [ Pan troglodytes (chimpanzee) ]

    Gene ID: 741670, updated on 29-Mar-2024

    Summary

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    Official Symbol
    P3H4provided by VGNC
    Official Full Name
    prolyl 3-hydroxylase family member 4 (inactive)provided by VGNC
    Primary source
    VGNC:VGNC:9603
    Locus tag
    CK820_G0039019
    See related
    Ensembl:ENSPTRG00000009179
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Also known as
    LEPREL4
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 17
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 19 NC_072417.2 (26329408..26340012)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 17 NC_072415.1 (24513955..24524473)

    Chromosome 19 - NC_072417.2Genomic Context describing neighboring genes Neighboring gene kelch like family member 11 Neighboring gene kelch like family member 10 Neighboring gene 5'-nucleotidase, cytosolic IIIB Neighboring gene FKBP prolyl isomerase 10 Neighboring gene junction plakoglobin Neighboring gene huntingtin associated protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables collagen binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in collagen fibril organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in peptidyl-lysine hydroxylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    endoplasmic reticulum protein SC65
    Names
    leprecan-like 4
    prolyl 3-hydroxylase family member 4 (non-enzymatic)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072417.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      26329408..26340012
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054670887.2 → XP_054526862.1  endoplasmic reticulum protein SC65 isoform X3

    2. XM_016931817.4 → XP_016787306.3  endoplasmic reticulum protein SC65 isoform X1

    3. XM_016931818.4 → XP_016787307.3  endoplasmic reticulum protein SC65 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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