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    GNPDA1 glucosamine-6-phosphate deaminase 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 738888, updated on 3-Apr-2024

    Summary

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    Official Symbol
    GNPDA1provided by VGNC
    Official Full Name
    glucosamine-6-phosphate deaminase 1provided by VGNC
    Primary source
    VGNC:VGNC:4017
    Locus tag
    CK820_G0009950
    See related
    Ensembl:ENSPTRG00000017357
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See GNPDA1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 4 NC_072402.2 (139722495..139735003, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 5 NC_072403.1 (139740588..139752984, complement)

    Chromosome 4 - NC_072402.2Genomic Context describing neighboring genes Neighboring gene DAP3 binding cell death enhancer 1 Neighboring gene protocadherin 12 Neighboring gene ring finger protein 14 Neighboring gene large ribosomal subunit protein uL11m-like Neighboring gene Nedd4 family interacting protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glucosamine-6-phosphate deaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables identical protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in N-acetylglucosamine catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in N-acetylneuraminate catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glucosamine catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glucosamine-6-phosphate isomerase 1
    XP_009448124.1
    XP_009448125.1
    XP_054540622.1
    XP_063666870.1
    XP_063666871.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072402.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      139722495..139735003 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009449850.5 → XP_009448125.1  glucosamine-6-phosphate isomerase 1 isoform X2

      See identical proteins and their annotated locations for XP_009448125.1

      UniProtKB/TrEMBL
      A0A2J8NIW4, A0A2J8NIX1, A0A6D2Y8B4, H2QRP1
      Conserved Domains (1) summary
      cl00339
      Location:1 → 253
      SugarP_isomerase; Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose ...

    2. XM_054684647.2 → XP_054540622.1  glucosamine-6-phosphate isomerase 1 isoform X2

      UniProtKB/TrEMBL
      A0A2J8NIW4, A0A6D2Y8B4, H2QRP1

    3. XM_009449849.5 → XP_009448124.1  glucosamine-6-phosphate isomerase 1 isoform X1

      UniProtKB/TrEMBL
      A0A2J8NIX1
      Conserved Domains (1) summary
      PRK00443
      Location:30 → 287
      nagB; glucosamine-6-phosphate deaminase; Provisional

    4. XM_063810800.1 → XP_063666870.1  glucosamine-6-phosphate isomerase 1 isoform X2

      UniProtKB/TrEMBL
      A0A2J8NIW4, A0A6D2Y8B4, H2QRP1

    5. XM_063810801.1 → XP_063666871.1  glucosamine-6-phosphate isomerase 1 isoform X2

      UniProtKB/TrEMBL
      A0A2J8NIW4, A0A6D2Y8B4, H2QRP1
    Nucleotide Protein
    Heading Accession and Version

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