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    RBMX RNA binding motif protein X-linked [ Pan troglodytes (chimpanzee) ]

    Gene ID: 738482, updated on 3-Apr-2024

    Summary

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    Official Symbol
    RBMXprovided by VGNC
    Official Full Name
    RNA binding motif protein X-linkedprovided by VGNC
    Primary source
    VGNC:VGNC:55726
    Locus tag
    CK820_G0045662
    See related
    Ensembl:ENSPTRG00000052587
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Also known as
    RBMXL1
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: X
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) X NC_072421.2 (134308342..134319944, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) X NC_072421.1 (134308651..134315961, complement)

    Chromosome X - NC_072421.2Genomic Context describing neighboring genes Neighboring gene GTP-binding nuclear protein Ran-like Neighboring gene ras-related protein Rab-28-like Neighboring gene small nucleolar RNA SNORD61 Neighboring gene serine/arginine repetitive matrix protein 1-like Neighboring gene G protein-coupled receptor 101

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mapping of chimpanzee full-length cDNAs onto the human genome unveils large potential divergence of the transcriptome. Sakate R, et al. Gene, 2007 Sep 1. PMID 17574350
    2. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding motif protein, X chromosome
    Names
    Heterogeneous nuclear ribonucleoprotein G
    RNA binding motif protein, X-linked-like 1
    hnRNP G

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001135206.1 → NP_001128678.1  RNA-binding motif protein, X chromosome

      See identical proteins and their annotated locations for NP_001128678.1

      Status: PROVISIONAL

      Source sequence(s)
      AB222151
      UniProtKB/Swiss-Prot
      A5A6M3
      UniProtKB/TrEMBL
      A0A2J8JPA4, A0A663DH16, K7BGI6, K7C4F6, K7D032
      Related
      ENSPTRP00000077078.1, ENSPTRT00000088375.1
      Conserved Domains (3) summary
      PRK14086
      Location:165 → 306
      dnaA; chromosomal replication initiator protein DnaA
      pfam08081
      Location:173 → 217
      RBM1CTR; RBM1CTR (NUC064) family
      cd12382
      Location:7 → 86
      RRM_RBMX_like; RNA recognition motif (RRM) found in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins

    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072421.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      134308342..134319944 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063803832.1 → XP_063659902.1  RNA-binding motif protein, X chromosome isoform X1

      UniProtKB/Swiss-Prot
      A5A6M3
      UniProtKB/TrEMBL
      A0A2J8JPA4, A0A663DH16, K7C4F6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A5A6M3.1 GenPept UniProtKB/Swiss-Prot:A5A6M3

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