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    GPT2 glutamic--pyruvic transaminase 2 [ Bos taurus (cattle) ]

    Gene ID: 618400, updated on 5-Mar-2024

    Summary

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    Official Symbol
    GPT2provided by VGNC
    Official Full Name
    glutamic--pyruvic transaminase 2provided by VGNC
    Primary source
    VGNC:VGNC:29617
    See related
    BGD:BT15097; Ensembl:ENSBTAG00000002980
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 18
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (15316320..15351062)

    Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA11 Neighboring gene branched-chain-amino-acid aminotransferase, mitochondrial-like Neighboring gene uncharacterized LOC132342796 Neighboring gene DnaJ heat shock protein family (Hsp40) member A2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-alanine:2-oxoglutarate aminotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alanine aminotransferase 2
    NP_001180116.2
    XP_005218795.1
    XP_024834335.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193187.3 → NP_001180116.2  alanine aminotransferase 2

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000018
      UniProtKB/TrEMBL
      A0A3Q1M4C5
      Related
      ENSBTAP00000003881.7, ENSBTAT00000003881.7
      Conserved Domains (1) summary
      cl27741
      Location:48 → 523
      Aminotran_1_2; Aminotransferase class I and II

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      15316320..15351062
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005218738.5 → XP_005218795.1  alanine aminotransferase 2 isoform X1

      See identical proteins and their annotated locations for XP_005218795.1

      UniProtKB/TrEMBL
      A0A3Q1M4C5
      Related
      ENSBTAP00000095755.1, ENSBTAT00000110801.1
      Conserved Domains (1) summary
      cl27741
      Location:48 → 523
      Aminotran_1_2; Aminotransferase class I and II

    2. XM_024978567.2 → XP_024834335.1  alanine aminotransferase 2 isoform X2

      Conserved Domains (1) summary
      cl27741
      Location:1 → 423
      Aminotran_1_2; Aminotransferase class I and II
    Nucleotide Protein Strain
    Heading Accession and Version

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