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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001098134.1 → NP_001091603.1 SPARC-related modular calcium-binding protein 2 precursor
See identical proteins and their annotated locations for NP_001091603.1
Status: PROVISIONAL
- Source sequence(s)
-
BC140672
- UniProtKB/TrEMBL
- A5D7T2, F1N126
- Related
- ENSBTAP00000090571.1, ENSBTAT00000103526.1
- Conserved Domains (6) summary
-
- smart00280
Location:39 → 84
- KAZAL; Kazal type serine protease inhibitors
- cd00191
Location:215 → 281
- TY; Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases
- pfam00086
Location:90 → 153
- Thyroglobulin_1; Thyroglobulin type-1 repeat
- pfam13499
Location:351 → 409
- EF-hand_7; EF-hand domain pair
- pfam16597
Location:154 → 212
- Thyroglob_assoc; Thyroglobulin_1 repeat associated disordered domain
- cl08302
Location:351 → 409
- EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ARS-UCD2.0 Primary Assembly
Genomic
-
NC_037336.1 Reference ARS-UCD2.0 Primary Assembly
- Range
-
102645195..102803021
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_024996839.2 → XP_024852607.1 SPARC-related modular calcium-binding protein 2 isoform X2
- UniProtKB/TrEMBL
-
F1N126
- Related
- ENSBTAP00000056754.2, ENSBTAT00000074522.2
- Conserved Domains (6) summary
-
- smart00280
Location:39 → 84
- KAZAL; Kazal type serine protease inhibitors
- cd00191
Location:226 → 292
- TY; Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases
- pfam00086
Location:90 → 153
- Thyroglobulin_1; Thyroglobulin type-1 repeat
- pfam16597
Location:154 → 223
- Thyroglob_assoc; Thyroglobulin_1 repeat associated disordered domain
- cd00252
Location:358 → 389
- EFh_SPARC_EC; EF-hand motif [structural motif]
- cl25349
Location:315 → 427
- EFh_SPARC_EC; EF-hand, extracellular calcium-binding (EC) motif, found in secreted protein acidic and rich in cysteine (SPARC)-like proteins
-
XM_024996838.2 → XP_024852606.1 SPARC-related modular calcium-binding protein 2 isoform X1
- UniProtKB/TrEMBL
-
A0A3Q1MID9
- Related
- ENSBTAP00000101057.1, ENSBTAT00000103685.1
- Conserved Domains (6) summary
-
- smart00280
Location:39 → 84
- KAZAL; Kazal type serine protease inhibitors
- cd00191
Location:215 → 281
- TY; Thyroglobulin type I repeats.; The N-terminal region of human thyroglobulin contains 11 type-1 repeats TY repeats are proposed to be inhibitors of cysteine proteases
- pfam00086
Location:90 → 153
- Thyroglobulin_1; Thyroglobulin type-1 repeat
- pfam16597
Location:154 → 212
- Thyroglob_assoc; Thyroglobulin_1 repeat associated disordered domain
- cd00252
Location:347 → 378
- EFh_SPARC_EC; EF-hand motif [structural motif]
- cl25349
Location:304 → 416
- EFh_SPARC_EC; EF-hand, extracellular calcium-binding (EC) motif, found in secreted protein acidic and rich in cysteine (SPARC)-like proteins