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    RAB39A RAB39A, member RAS oncogene family [ Canis lupus familiaris (dog) ]

    Gene ID: 611576, updated on 5-Mar-2024

    Summary

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    Official Symbol
    RAB39Aprovided by VGNC
    Official Full Name
    RAB39A, member RAS oncogene familyprovided by VGNC
    Primary source
    VGNC:VGNC:111679
    See related
    Ensembl:ENSCAFG00845003650
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    RAB39
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (24543996..24576058, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 5 NC_006587.4 (24440396..24472421, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (24551508..24583580, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 5 NC_049265.1 (24591329..24623183, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (24492978..24524815, complement)

    Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene cullin 5 Neighboring gene 60S ribosomal protein L22-like Neighboring gene malate dehydrogenase, mitochondrial-like Neighboring gene 40S ribosomal protein S6-like Neighboring gene solute carrier family 35 member F2 Neighboring gene sarcolipin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Rab protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related protein Rab-39A
    Names
    RAB39, member RAS oncogene family

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051809.1 Reference ROS_Cfam_1.0

      Range
      24543996..24576058 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038665014.1 → XP_038520942.1  ras-related protein Rab-39A isoform X1

      UniProtKB/TrEMBL
      A0A8C0K6K8, A0A8C0MKW1, A0A8I3RRI9
      Related
      ENSCAFP00845005190.1, ENSCAFT00845006520.1
      Conserved Domains (1) summary
      cd04111
      Location:7 → 217
      Rab39; Rab GTPase family 39 (Rab39)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049265.1 Alternate UMICH_Zoey_3.1

      Range
      24591329..24623183 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038475156.1 → XP_038331084.1  ras-related protein Rab-39A isoform X1

      Conserved Domains (1) summary
      cd04111
      Location:7 → 217
      Rab39; Rab GTPase family 39 (Rab39)

    2. XM_038475157.1 → XP_038331085.1  ras-related protein Rab-39A isoform X2

      Conserved Domains (1) summary
      cl38936
      Location:22 → 174
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

      Range
      24492978..24524815 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038600486.1 → XP_038456414.1  ras-related protein Rab-39A isoform X1

      Conserved Domains (1) summary
      cd04111
      Location:7 → 217
      Rab39; Rab GTPase family 39 (Rab39)

    2. XM_038600487.1 → XP_038456415.1  ras-related protein Rab-39A isoform X3

      Conserved Domains (1) summary
      cl38936
      Location:22 → 174
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

      Range
      24551508..24583580 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038536287.1 → XP_038392215.1  ras-related protein Rab-39A isoform X1

      UniProtKB/TrEMBL
      A0A8C0K6K8, A0A8C0MKW1, A0A8I3RRI9
      Conserved Domains (1) summary
      cd04111
      Location:7 → 217
      Rab39; Rab GTPase family 39 (Rab39)

    2. XM_038536288.1 → XP_038392216.1  ras-related protein Rab-39A isoform X4

      Conserved Domains (1) summary
      cl38936
      Location:22 → 174
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      24440396..24472421 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005619830.4 → XP_005619887.2  ras-related protein Rab-39A isoform X1

      UniProtKB/TrEMBL
      A0A8C0K6K8, A0A8C0MKW1, A0A8I3RRI9
      Conserved Domains (1) summary
      cd04111
      Location:7 → 217
      Rab39; Rab GTPase family 39 (Rab39)

    2. XM_038511741.1 → XP_038367669.1  ras-related protein Rab-39A isoform X5

      Conserved Domains (1) summary
      cl38936
      Location:22 → 174
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version

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