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    FAM117A family with sequence similarity 117 member A [ Canis lupus familiaris (dog) ]

    Gene ID: 609175, updated on 5-Mar-2024

    Summary

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    Official Symbol
    FAM117Aprovided by VGNC
    Official Full Name
    family with sequence similarity 117 member Aprovided by VGNC
    Primary source
    VGNC:VGNC:40582
    See related
    Ensembl:ENSCAFG00845011405
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 9
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (26573273..26616202, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (25236454..25279362, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (25729470..25772378, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (25341180..25384012, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (25600148..25643000, complement)

    Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene speckle type BTB/POZ protein Neighboring gene solute carrier family 35 member B1 Neighboring gene uncharacterized LOC111097374 Neighboring gene uncharacterized LOC111097373 Neighboring gene lysine acetyltransferase 7 Neighboring gene uncharacterized LOC119873285

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein FAM117A; LOW QUALITY PROTEIN: protein FAM117A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051813.1 Reference ROS_Cfam_1.0

      Range
      26573273..26616202 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038676827.1 → XP_038532755.1  protein FAM117A isoform X2

      UniProtKB/TrEMBL
      A0A8C0LHI1, A0A8C0LU97, A0A8C0LZF1, A0A8I3NKP9, A0A8P0TDE3
      Related
      ENSCAFP00845015849.1, ENSCAFT00845020217.1
      Conserved Domains (1) summary
      pfam15388
      Location:86 → 398
      FAM117; Protein Family FAM117

    2. XM_038676828.1 → XP_038532756.1  protein FAM117A isoform X1

      UniProtKB/TrEMBL
      A0A8C0LZH1
      Conserved Domains (1) summary
      pfam15388
      Location:51 → 363
      FAM117; Protein Family FAM117

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049269.1 Alternate UMICH_Zoey_3.1

      Range
      25341180..25384012 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038485871.1 → XP_038341799.1  LOW QUALITY PROTEIN: protein FAM117A isoform X2

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

      Range
      25600148..25643000 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038611631.1 → XP_038467559.1  LOW QUALITY PROTEIN: protein FAM117A isoform X2

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

      Range
      25729470..25772378 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038547630.1 → XP_038403558.1  protein FAM117A isoform X2

      UniProtKB/TrEMBL
      A0A8C0LHI1, A0A8C0LU97, A0A8C0LZF1, A0A8I3NKP9, A0A8P0TDE3
      Conserved Domains (1) summary
      pfam15388
      Location:86 → 398
      FAM117; Protein Family FAM117

    2. XM_038547631.1 → XP_038403559.1  protein FAM117A isoform X1

      UniProtKB/TrEMBL
      A0A8C0LZH1
      Conserved Domains (1) summary
      pfam15388
      Location:51 → 363
      FAM117; Protein Family FAM117

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      25236454..25279362 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_846387.5 → XP_851480.1  protein FAM117A isoform X2

      UniProtKB/TrEMBL
      A0A8C0LHI1, A0A8C0LU97, A0A8C0LZF1, A0A8I3NKP9, A0A8P0TDE3
      Conserved Domains (1) summary
      pfam15388
      Location:86 → 398
      FAM117; Protein Family FAM117

    2. XM_022423100.2 → XP_022278808.1  protein FAM117A isoform X1

      UniProtKB/TrEMBL
      A0A8C0LZH1
      Conserved Domains (1) summary
      pfam15388
      Location:51 → 363
      FAM117; Protein Family FAM117
    Nucleotide Protein
    Heading Accession and Version

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