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    mrpl41 mitochondrial ribosomal protein L41 [ Danio rerio (zebrafish) ]

    Gene ID: 553805, updated on 27-Mar-2024

    Summary

    Official Symbol
    mrpl41provided by ZNC
    Official Full Name
    mitochondrial ribosomal protein L41provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050522-200
    See related
    Ensembl:ENSDARG00000002264 AllianceGenome:ZFIN:ZDB-GENE-050522-200
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:112362
    Summary
    Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to act upstream of or within apoptotic process. Predicted to be located in mitochondrion and ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL41 (mitochondrial ribosomal protein L41). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    Location:
    chromosome: 5
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (25072949..25075183)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (24569149..24571383)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene globoside alpha-1,3-N-acetylgalactosaminyltransferase 1, like 5 Neighboring gene patatin-like phospholipase domain containing 7b Neighboring gene diphthamide biosynthesis 7 Neighboring gene PAXX non-homologous end joining factor

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Pathways from PubChem

    General gene information

    Clone Names

    • MGC112362

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    enables structural constituent of ribosome ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in translation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in translation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    part_of mitochondrial large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of mitochondrial large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
     
    part_of mitochondrial large ribosomal subunit ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    large ribosomal subunit protein mL41
    Names
    39S ribosomal protein L41, mitochondrial
    L41mt
    MRP-L41

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001020767.1NP_001018603.1  large ribosomal subunit protein mL41 precursor

      See identical proteins and their annotated locations for NP_001018603.1

      Status: PROVISIONAL

      Source sequence(s)
      BC095781
      UniProtKB/Swiss-Prot
      Q502B0
      UniProtKB/TrEMBL
      B2GSF4
      Related
      ENSDARP00000013437.7, ENSDART00000012268.8
      Conserved Domains (1) summary
      pfam09809
      Location:13125
      MRP-L27; Mitochondrial ribosomal protein L27

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      25072949..25075183
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)