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    SCARB2 scavenger receptor class B member 2 [ Bos taurus (cattle) ]

    Gene ID: 533177, updated on 5-Mar-2024

    Summary

    Official Symbol
    SCARB2provided by VGNC
    Official Full Name
    scavenger receptor class B member 2provided by VGNC
    Primary source
    VGNC:VGNC:34325
    See related
    BGD:BT14047; Ensembl:ENSBTAG00000010956
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
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    Genomic context

    Location:
    chromosome: 6
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 6 NC_037333.1 (91048374..91130984, complement)

    Chromosome 6 - NC_037333.1Genomic Context describing neighboring genes Neighboring gene ADP-ribosyltransferase 3 (inactive) Neighboring gene C-X-C motif chemokine ligand 11 Neighboring gene nucleoporin 54 Neighboring gene uncharacterized LOC132345529 Neighboring gene family with sequence similarity 47 member E Neighboring gene small ribosomal subunit protein uS12-like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037333.1 Chromosome 6 Reference ARS-UCD2.0 Primary Assembly

    Pathways from PubChem

    General gene information

    Markers

    Clone Names

    • MGC140207

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables scavenger receptor activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in protein targeting to lysosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in receptor-mediated endocytosis IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in regulation of glucosylceramidase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    lysosome membrane protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001102153.1NP_001095623.1  lysosome membrane protein 2 precursor

      See identical proteins and their annotated locations for NP_001095623.1

      Status: PROVISIONAL

      Source sequence(s)
      BC149935
      UniProtKB/TrEMBL
      A0A3S5ZPN6, A6QQP4, F1N1Q4
      Related
      ENSBTAP00000014549.6, ENSBTAT00000014549.6
      Conserved Domains (1) summary
      pfam01130
      Location:18455
      CD36; CD36 family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037333.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      91048374..91130984 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)