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    XAF1 XIAP associated factor 1 [ Bos taurus (cattle) ]

    Gene ID: 509740, updated on 3-Apr-2024

    Summary

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    Official Symbol
    XAF1provided by VGNC
    Official Full Name
    XIAP associated factor 1provided by VGNC
    Primary source
    VGNC:VGNC:36982
    See related
    BGD:BT20344; Ensembl:ENSBTAG00000011343
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    BIRC4BP; HSXIAPAF1
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 19
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (25148648..25162125, complement)

    Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene proteasome maturation protein-like Neighboring gene F-box protein 39 Neighboring gene selenoprotein W pseudogene Neighboring gene solute carrier family 13 member 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    XIAP-associated factor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001035075.1 → NP_001030247.1  XIAP-associated factor 1

      See identical proteins and their annotated locations for NP_001030247.1

      Status: PROVISIONAL

      Source sequence(s)
      BT021626
      UniProtKB/TrEMBL
      A0A3Q1MVH0
      Related
      ENSBTAP00000059031.1, ENSBTAT00000076045.2
      Conserved Domains (1) summary
      PLN03086
      Location:7 → 127
      PLN03086; PRLI-interacting factor K; Provisional

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      25148648..25162125 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059877884.1 → XP_059733867.1  XIAP-associated factor 1 isoform X1

    2. XM_059877885.1 → XP_059733868.1  XIAP-associated factor 1 isoform X3

      Related
      ENSBTAP00000072660.2, ENSBTAT00000066384.2

    3. XM_005220210.5 → XP_005220267.1  XIAP-associated factor 1 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1MVH0
      Related
      ENSBTAP00000089591.1, ENSBTAT00000129246.1
      Conserved Domains (1) summary
      PLN03086
      Location:6 → 121
      PLN03086; PRLI-interacting factor K; Provisional

    4. XM_059877886.1 → XP_059733869.1  XIAP-associated factor 1 isoform X5

      UniProtKB/TrEMBL
      A0A140T8C1, F1MQJ9
      Related
      ENSBTAP00000043012.4, ENSBTAT00000045638.5

    5. XM_024979881.2 → XP_024835649.1  XIAP-associated factor 1 isoform X4

      UniProtKB/TrEMBL
      A0A3Q1MVH0
      Conserved Domains (1) summary
      cl27293
      Location:4 → 99
      UFD1; Ubiquitin fusion degradation protein UFD1

    6. XM_024979884.2 → XP_024835652.1  XIAP-associated factor 1 isoform X4

      UniProtKB/TrEMBL
      A0A3Q1MVH0
      Conserved Domains (1) summary
      cl27293
      Location:4 → 99
      UFD1; Ubiquitin fusion degradation protein UFD1
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q58DH1.2 GenPept UniProtKB/Swiss-Prot:Q58DH1

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