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    GTF2F2 general transcription factor IIF subunit 2 [ Bos taurus (cattle) ]

    Gene ID: 509259, updated on 4-Apr-2024

    Summary

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    Official Symbol
    GTF2F2provided by VGNC
    Official Full Name
    general transcription factor IIF subunit 2provided by VGNC
    Primary source
    VGNC:VGNC:53815
    See related
    BGD:BT23117; Ensembl:ENSBTAG00000034495
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 12
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 12 NC_037339.1 (15282710..15418924)

    Chromosome 12 - NC_037339.1Genomic Context describing neighboring genes Neighboring gene CAP1 protein-like pseudogene Neighboring gene uncharacterized LOC112449122 Neighboring gene potassium channel tetramerization domain containing 4 Neighboring gene small nucleolar RNA SNORA31 Neighboring gene small nucleolar RNA SNORA31 Neighboring gene tumor protein, translationally-controlled 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037339.1 Chromosome 12 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Clone Names

    • MGC133695

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription initiation at RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription factor TFIIF complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    general transcription factor IIF subunit 2
    Names
    ATP-dependent helicase GTF2F2
    TFIIF-beta
    general transcription factor IIF, polypeptide 2, 30kDa
    transcription initiation factor IIF subunit beta
    NP_001033153.1
    XP_005213654.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001038064.1 → NP_001033153.1  general transcription factor IIF subunit 2

      See identical proteins and their annotated locations for NP_001033153.1

      Status: PROVISIONAL

      Source sequence(s)
      BC111360
      UniProtKB/Swiss-Prot
      Q2T9L9
      Related
      ENSBTAP00000045836.2, ENSBTAT00000048870.3
      Conserved Domains (1) summary
      cl02122
      Location:6 → 247
      TFIIF_beta; Transcription initiation factor IIF, beta subunit

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037339.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      15282710..15418924
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005213597.5 → XP_005213654.1  general transcription factor IIF subunit 2 isoform X1

      Related
      ENSBTAP00000094937.1, ENSBTAT00000123353.1
      Conserved Domains (1) summary
      pfam02270
      Location:13 → 209
      TFIIF_beta; Transcription initiation factor IIF, beta subunit
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2T9L9.1 GenPept UniProtKB/Swiss-Prot:Q2T9L9

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.