U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    STX1B syntaxin 1B [ Canis lupus familiaris (dog) ]

    Gene ID: 489918, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    STX1Bprovided by VGNC
    Official Full Name
    syntaxin 1Bprovided by VGNC
    Primary source
    VGNC:VGNC:49723
    See related
    Ensembl:ENSCAFG00845012794
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    STX1B2
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 6
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (17332948..17350471)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (18777682..18795209)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (17364988..17382509)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (17133312..17150823)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (17052453..17069975)

    Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 646 Neighboring gene zinc finger protein 668 Neighboring gene syntaxin 4 Neighboring gene hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 Neighboring gene SET domain containing 1A, histone lysine methyltransferase

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNAP receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables SNARE binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exocytic insertion of neurotransmitter receptor to postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle docking IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle fusion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SNARE complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endomembrane system IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    syntaxin-1B
    Names
    syntaxin 1B2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051810.1 Reference ROS_Cfam_1.0

      Range
      17332948..17350471
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038668584.1 → XP_038524512.1  syntaxin-1B

      UniProtKB/TrEMBL
      A0A8C0L090, A0A8C0YWE8, A0A8I3NPQ4
      Related
      ENSCAFP00845017829.1, ENSCAFT00845022736.1
      Conserved Domains (2) summary
      pfam00804
      Location:29 → 226
      Syntaxin
      pfam05739
      Location:227 → 278
      SNARE; SNARE domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049266.1 Alternate UMICH_Zoey_3.1

      Range
      17133312..17150823
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038478529.1 → XP_038334457.1  syntaxin-1B

      Conserved Domains (2) summary
      pfam00804
      Location:29 → 226
      Syntaxin
      pfam05739
      Location:227 → 278
      SNARE; SNARE domain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

      Range
      17052453..17069975
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038603860.1 → XP_038459788.1  syntaxin-1B

      Conserved Domains (2) summary
      pfam00804
      Location:29 → 226
      Syntaxin
      pfam05739
      Location:227 → 278
      SNARE; SNARE domain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

      Range
      17364988..17382509
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038539780.1 → XP_038395708.1  syntaxin-1B

      UniProtKB/TrEMBL
      A0A8C0L090, A0A8C0YWE8, A0A8I3NPQ4
      Conserved Domains (2) summary
      pfam00804
      Location:29 → 226
      Syntaxin
      pfam05739
      Location:227 → 278
      SNARE; SNARE domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      18777682..18795209
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038542446.1 → XP_038398374.1  syntaxin-1B

      UniProtKB/TrEMBL
      A0A8C0L090, A0A8C0YWE8, A0A8I3NPQ4
      Conserved Domains (2) summary
      pfam00804
      Location:29 → 226
      Syntaxin
      pfam05739
      Location:227 → 278
      SNARE; SNARE domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.