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    STOX1 storkhead box 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 489017, updated on 5-Mar-2024

    Summary

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    Official Symbol
    STOX1provided by VGNC
    Official Full Name
    storkhead box 1provided by VGNC
    Primary source
    VGNC:VGNC:49791
    See related
    Ensembl:ENSCAFG00845002777
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 4 NC_051808.1 (20286922..20338157)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 4 NC_006586.4 (20144988..20196158)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 4 NC_049225.1 (20733585..20784970)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 4 NC_049264.1 (20187255..20238841)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 4 NC_049745.1 (20390704..20441873)

    Chromosome 4 - NC_051808.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119871463 Neighboring gene cell division cycle and apoptosis regulator 1 Neighboring gene small nucleolar RNA SNORD98 Neighboring gene U6 spliceosomal RNA Neighboring gene DExD-box helicase 50 Neighboring gene DExD-box helicase 21

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    storkhead-box protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051808.1 Reference ROS_Cfam_1.0

      Range
      20286922..20338157
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038662766.1 → XP_038518694.1  storkhead-box protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NPH9, A0A8I3MK36
      Related
      ENSCAFP00845003936.1, ENSCAFT00845004934.1
      Conserved Domains (1) summary
      pfam10264
      Location:111 → 189
      Stork_head; Winged helix Storkhead-box1 domain

    2. XM_038662768.1 → XP_038518696.1  storkhead-box protein 1 isoform X3

      Conserved Domains (1) summary
      pfam10264
      Location:111 → 155
      Stork_head; Winged helix Storkhead-box1 domain

    3. XM_038662767.1 → XP_038518695.1  storkhead-box protein 1 isoform X2

      Conserved Domains (1) summary
      pfam10264
      Location:111 → 189
      Stork_head; Winged helix Storkhead-box1 domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049264.1 Alternate UMICH_Zoey_3.1

      Range
      20187255..20238841
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038473097.1 → XP_038329025.1  storkhead-box protein 1 isoform X1

      Conserved Domains (1) summary
      pfam10264
      Location:111 → 189
      Stork_head; Winged helix Storkhead-box1 domain

    2. XM_038473098.1 → XP_038329026.1  storkhead-box protein 1 isoform X2

      Conserved Domains (1) summary
      pfam10264
      Location:111 → 189
      Stork_head; Winged helix Storkhead-box1 domain

    3. XM_038473099.1 → XP_038329027.1  storkhead-box protein 1 isoform X3

      Conserved Domains (1) summary
      pfam10264
      Location:111 → 155
      Stork_head; Winged helix Storkhead-box1 domain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049745.1 Alternate UNSW_CanFamBas_1.0

      Range
      20390704..20441873
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038598463.1 → XP_038454391.1  storkhead-box protein 1 isoform X1

    2. XM_038598464.1 → XP_038454392.1  storkhead-box protein 1 isoform X2

      Conserved Domains (1) summary
      pfam10264
      Location:111 → 189
      Stork_head; Winged helix Storkhead-box1 domain

    3. XM_038598465.1 → XP_038454393.1  storkhead-box protein 1 isoform X3

      Conserved Domains (1) summary
      pfam10264
      Location:111 → 155
      Stork_head; Winged helix Storkhead-box1 domain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049225.1 Alternate UU_Cfam_GSD_1.0

      Range
      20733585..20784970
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038534147.1 → XP_038390075.1  storkhead-box protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NPH9

    2. XM_038534149.1 → XP_038390077.1  storkhead-box protein 1 isoform X3

      Conserved Domains (1) summary
      pfam10264
      Location:111 → 155
      Stork_head; Winged helix Storkhead-box1 domain

    3. XM_038534148.1 → XP_038390076.1  storkhead-box protein 1 isoform X2

      Conserved Domains (1) summary
      pfam10264
      Location:111 → 189
      Stork_head; Winged helix Storkhead-box1 domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006586.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      20144988..20196158
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038490111.1 → XP_038346039.1  storkhead-box protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NPH9, A0A8C0PXI5, A0A8P0SI91
      Conserved Domains (1) summary
      pfam10264
      Location:111 → 189
      Stork_head; Winged helix Storkhead-box1 domain

    2. XM_038490120.1 → XP_038346048.1  storkhead-box protein 1 isoform X2

      Conserved Domains (1) summary
      pfam10264
      Location:111 → 189
      Stork_head; Winged helix Storkhead-box1 domain

    3. XM_038490127.1 → XP_038346055.1  storkhead-box protein 1 isoform X3

      Conserved Domains (1) summary
      pfam10264
      Location:111 → 155
      Stork_head; Winged helix Storkhead-box1 domain
    Nucleotide Protein
    Heading Accession and Version

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