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    SNX20 sorting nexin 20 [ Canis lupus familiaris (dog) ]

    Gene ID: 487287, updated on 5-Mar-2024

    Summary

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    Official Symbol
    SNX20provided by VGNC
    Official Full Name
    sorting nexin 20provided by VGNC
    Primary source
    VGNC:VGNC:46630
    See related
    Ensembl:ENSCAFG00845003924
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 2 NC_051806.1 (65226579..65235362)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 2 NC_006584.4 (61254013..61262796)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 2 NC_049223.1 (63957752..63966522)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 2 NC_049262.1 (62050248..62059016)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 2 NC_049743.1 (63070208..63078984)

    Chromosome 2 - NC_051806.1Genomic Context describing neighboring genes Neighboring gene CYLD lysine 63 deubiquitinase Neighboring gene uncharacterized LOC111094690 Neighboring gene nucleotide binding oligomerization domain containing 2 Neighboring gene uncharacterized LOC111092892 Neighboring gene uncharacterized LOC102151795 Neighboring gene NKD inhibitor of WNT signaling pathway 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in early endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sorting nexin-20

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051806.1 Reference ROS_Cfam_1.0

      Range
      65226579..65235362
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038659376.1 → XP_038515304.1  sorting nexin-20

      UniProtKB/TrEMBL
      A0A8C0JIX5, A0A8C0MTS2, A0A8C0RFN4, A0A8I3N7A3
      Related
      ENSCAFP00845005638.1, ENSCAFT00845007069.1
      Conserved Domains (1) summary
      cl02563
      Location:76 → 189
      PX_domain; The Phox Homology domain, a phosphoinositide binding module

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049262.1 Alternate UMICH_Zoey_3.1

      Range
      62050248..62059016
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038470243.1 → XP_038326171.1  sorting nexin-20

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049743.1 Alternate UNSW_CanFamBas_1.0

      Range
      63070208..63078984
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038595289.1 → XP_038451217.1  sorting nexin-20

      Conserved Domains (1) summary
      cl02563
      Location:76 → 189
      PX_domain; The Phox Homology domain, a phosphoinositide binding module

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049223.1 Alternate UU_Cfam_GSD_1.0

      Range
      63957752..63966522
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038531068.1 → XP_038386996.1  sorting nexin-20

      UniProtKB/TrEMBL
      A0A8C0RFN4, A0A8C0SH88

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006584.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      61254013..61262796
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_544413.7 → XP_544413.2  sorting nexin-20

      UniProtKB/TrEMBL
      A0A8C0JIX5, A0A8C0MTS2, A0A8C0RFN4, A0A8I3N7A3
      Conserved Domains (1) summary
      cl02563
      Location:76 → 189
      PX_domain; The Phox Homology domain, a phosphoinositide binding module
    Nucleotide Protein
    Heading Accession and Version

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