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    TADA1 transcriptional adaptor 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 480090, updated on 5-Mar-2024

    Summary

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    Official Symbol
    TADA1provided by VGNC
    Official Full Name
    transcriptional adaptor 1provided by VGNC
    Primary source
    VGNC:VGNC:47069
    See related
    Ensembl:ENSCAFG00845003902
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    TADA1L
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 7
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 7 NC_051811.1 (31335115..31351744)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 7 NC_006589.4 (31051937..31068532)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 7 NC_049228.1 (31443614..31460232)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 7 NC_049267.1 (31172869..31189461)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 7 NC_049748.1 (31205097..31221708)

    Chromosome 7 - NC_051811.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111096675 Neighboring gene immunoglobulin like domain containing receptor 2 Neighboring gene uncharacterized LOC111096677 Neighboring gene uncharacterized LOC119872534 Neighboring gene small nucleolar RNA SNORA52 Neighboring gene pogo transposable element derived with KRAB domain Neighboring gene formin 2 Neighboring gene uncharacterized LOC119872535

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SAGA complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcriptional adapter 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051811.1 Reference ROS_Cfam_1.0

      Range
      31335115..31351744
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038671482.1 → XP_038527410.1  transcriptional adapter 1

      UniProtKB/TrEMBL
      A0A8C0P4D7, A0A8I3RT79
      Related
      ENSCAFP00845005602.1, ENSCAFT00845007023.1
      Conserved Domains (1) summary
      pfam12767
      Location:7 → 193
      SAGA-Tad1; Transcriptional regulator of RNA polII, SAGA, subunit

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049267.1 Alternate UMICH_Zoey_3.1

      Range
      31172869..31189461
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038481296.1 → XP_038337224.1  transcriptional adapter 1

      Conserved Domains (1) summary
      pfam12767
      Location:7 → 193
      SAGA-Tad1; Transcriptional regulator of RNA polII, SAGA, subunit

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049748.1 Alternate UNSW_CanFamBas_1.0

      Range
      31205097..31221708
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038606809.1 → XP_038462737.1  transcriptional adapter 1

      Conserved Domains (1) summary
      pfam12767
      Location:7 → 193
      SAGA-Tad1; Transcriptional regulator of RNA polII, SAGA, subunit

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049228.1 Alternate UU_Cfam_GSD_1.0

      Range
      31443614..31460232
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038542658.1 → XP_038398586.1  transcriptional adapter 1

      UniProtKB/TrEMBL
      A0A8C0P4D7, A0A8I3RT79
      Conserved Domains (1) summary
      pfam12767
      Location:7 → 193
      SAGA-Tad1; Transcriptional regulator of RNA polII, SAGA, subunit

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006589.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      31051937..31068532
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_537213.7 → XP_537213.2  transcriptional adapter 1

      UniProtKB/TrEMBL
      A0A8C0P4D7, A0A8I3RT79
      Conserved Domains (1) summary
      pfam12767
      Location:7 → 193
      SAGA-Tad1; Transcriptional regulator of RNA polII, SAGA, subunit
    Nucleotide Protein
    Heading Accession and Version

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