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    HABP2 hyaluronan binding protein 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 477822, updated on 5-Mar-2024

    Summary

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    Official Symbol
    HABP2provided by VGNC
    Official Full Name
    hyaluronan binding protein 2provided by VGNC
    Primary source
    VGNC:VGNC:52994
    See related
    Ensembl:ENSCAFG00845030120
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 28
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 28 NC_051832.1 (25021508..25054218)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 28 NC_006610.4 (24641006..24673772)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 28 NC_049249.1 (24786098..24818844)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 28 NC_049288.1 (24578909..24611633)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 28 NC_049769.1 (24586609..24619368)

    Chromosome 28 - NC_051832.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119866523 Neighboring gene uncharacterized LOC111093054 Neighboring gene uncharacterized LOC119866592 Neighboring gene nebulin related anchoring protein Neighboring gene uncharacterized LOC119866593 Neighboring gene caspase 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hyaluronan-binding protein 2
    XP_005637794.1
    XP_038296548.1
    XP_038371150.1
    XP_038434764.1
    XP_038498965.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051832.1 Reference ROS_Cfam_1.0

      Range
      25021508..25054218
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038440620.1 → XP_038296548.1  hyaluronan-binding protein 2

      UniProtKB/TrEMBL
      A0A8C0NQV1, A0A8I3Q3J0
      Related
      ENSCAFP00845041973.1, ENSCAFT00845053425.1
      Conserved Domains (4) summary
      cd00054
      Location:154 → 186
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00108
      Location:191 → 275
      KR; Kringle domain; Kringle domains are believed to play a role in binding mediators, such as peptides, other proteins, membranes, or phospholipids. They are autonomous structural domains, found in a varying number of copies, in blood clotting and ...
      cd00190
      Location:311 → 550
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
      pfam00008
      Location:75 → 105
      EGF; EGF-like domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049288.1 Alternate UMICH_Zoey_3.1

      Range
      24578909..24611633
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038515222.1 → XP_038371150.1  hyaluronan-binding protein 2

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049769.1 Alternate UNSW_CanFamBas_1.0

      Range
      24586609..24619368
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038643037.1 → XP_038498965.1  hyaluronan-binding protein 2

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049249.1 Alternate UU_Cfam_GSD_1.0

      Range
      24786098..24818844
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038578836.1 → XP_038434764.1  hyaluronan-binding protein 2

      UniProtKB/TrEMBL
      A0A8C0TDB5, A0A8P0NCZ6

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006610.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      24641006..24673772
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005637737.4 → XP_005637794.1  hyaluronan-binding protein 2

      UniProtKB/TrEMBL
      A0A8C0TDB5, A0A8P0NCZ6
      Conserved Domains (5) summary
      smart00020
      Location:310 → 547
      Tryp_SPc; Trypsin-like serine protease
      cd00054
      Location:154 → 186
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00108
      Location:191 → 275
      KR; Kringle domain; Kringle domains are believed to play a role in binding mediators, such as peptides, other proteins, membranes, or phospholipids. They are autonomous structural domains, found in a varying number of copies, in blood clotting and ...
      cd00190
      Location:311 → 550
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
      pfam00008
      Location:75 → 105
      EGF; EGF-like domain
    Nucleotide Protein
    Heading Accession and Version

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