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    WTAP WT1 associated protein [ Canis lupus familiaris (dog) ]

    Gene ID: 476259, updated on 11-Apr-2024

    Summary

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    Official Symbol
    WTAPprovided by VGNC
    Official Full Name
    WT1 associated proteinprovided by VGNC
    Primary source
    VGNC:VGNC:54003
    See related
    Ensembl:ENSCAFG00845001806
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (49160699..49189019)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (49818344..49846503)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (49480343..49508532) , (49529308..49557423)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (49043176..49071381)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (48914192..48942472)

    Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene superoxide dismutase 2 Neighboring gene uncharacterized LOC111090685 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene acetyl-CoA acetyltransferase 2 Neighboring gene microRNA mir-1836 Neighboring gene t-complex 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of alternative mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pre-mRNA-splicing regulator WTAP
    Names
    Wilms tumor 1 associated protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051805.1 Reference ROS_Cfam_1.0

      Range
      49160699..49189019
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038654570.1 → XP_038510498.1  pre-mRNA-splicing regulator WTAP isoform X1

      UniProtKB/TrEMBL
      A0A8C0RJM3, A0A8I3MIW9
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    2. XM_038654573.1 → XP_038510501.1  pre-mRNA-splicing regulator WTAP isoform X3

      UniProtKB/TrEMBL
      A0A8C0RID4
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 150
      Wtap; WTAP/Mum2p family

    3. XM_038654572.1 → XP_038510500.1  pre-mRNA-splicing regulator WTAP isoform X2

      UniProtKB/TrEMBL
      A0A8C0R5M0, A0A8C0TN68, A0A8I3N018
      Related
      ENSCAFP00845002531.1, ENSCAFT00845003183.1
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 150
      Wtap; WTAP/Mum2p family

    4. XM_038654567.1 → XP_038510495.1  pre-mRNA-splicing regulator WTAP isoform X1

      UniProtKB/TrEMBL
      A0A8C0RJM3, A0A8I3MIW9
      Related
      ENSCAFP00845002539.1, ENSCAFT00845003196.1
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    5. XM_038654571.1 → XP_038510499.1  pre-mRNA-splicing regulator WTAP isoform X1

      UniProtKB/TrEMBL
      A0A8C0RJM3, A0A8I3MIW9
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    6. XM_038654568.1 → XP_038510496.1  pre-mRNA-splicing regulator WTAP isoform X1

      UniProtKB/TrEMBL
      A0A8C0RJM3, A0A8I3MIW9
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    7. XM_038654569.1 → XP_038510497.1  pre-mRNA-splicing regulator WTAP isoform X1

      UniProtKB/TrEMBL
      A0A8C0RJM3, A0A8I3MIW9
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049261.1 Alternate UMICH_Zoey_3.1

      Range
      49043176..49071381
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038465810.1 → XP_038321738.1  pre-mRNA-splicing regulator WTAP isoform X1

      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    2. XM_038465811.1 → XP_038321739.1  pre-mRNA-splicing regulator WTAP isoform X2

      Conserved Domains (1) summary
      pfam17098
      Location:68 → 150
      Wtap; WTAP/Mum2p family

    3. XM_038465806.1 → XP_038321734.1  pre-mRNA-splicing regulator WTAP isoform X1

      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    4. XM_038465809.1 → XP_038321737.1  pre-mRNA-splicing regulator WTAP isoform X1

      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    5. XM_038465808.1 → XP_038321736.1  pre-mRNA-splicing regulator WTAP isoform X1

      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    6. XM_038465807.1 → XP_038321735.1  pre-mRNA-splicing regulator WTAP isoform X1

      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

      Range
      48914192..48942472
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038590776.1 → XP_038446704.1  pre-mRNA-splicing regulator WTAP isoform X1

      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    2. XM_038590779.1 → XP_038446707.1  pre-mRNA-splicing regulator WTAP isoform X3

      Conserved Domains (1) summary
      pfam17098
      Location:68 → 150
      Wtap; WTAP/Mum2p family

    3. XM_038590778.1 → XP_038446706.1  pre-mRNA-splicing regulator WTAP isoform X2

      Conserved Domains (1) summary
      pfam17098
      Location:68 → 150
      Wtap; WTAP/Mum2p family

    4. XM_038590773.1 → XP_038446701.1  pre-mRNA-splicing regulator WTAP isoform X1

      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    5. XM_038590777.1 → XP_038446705.1  pre-mRNA-splicing regulator WTAP isoform X1

      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    6. XM_038590774.1 → XP_038446702.1  pre-mRNA-splicing regulator WTAP isoform X1

      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    7. XM_038590775.1 → XP_038446703.1  pre-mRNA-splicing regulator WTAP isoform X1

      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

      Range
      49480343..49508532
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    2. NC_049222.1 Alternate UU_Cfam_GSD_1.0

      Range
      49529308..49557423
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038526476.1 → XP_038382404.1  pre-mRNA-splicing regulator WTAP isoform X4

      UniProtKB/TrEMBL
      A0A8C0RJM3, A0A8I3MIW9
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    2. XM_038526478.1 → XP_038382406.1  pre-mRNA-splicing regulator WTAP isoform X6

      UniProtKB/TrEMBL
      A0A8C0RID4
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 150
      Wtap; WTAP/Mum2p family

    3. XM_038526477.1 → XP_038382405.1  pre-mRNA-splicing regulator WTAP isoform X5

      UniProtKB/TrEMBL
      A0A8C0R5M0, A0A8C0TN68, A0A8I3N018
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 150
      Wtap; WTAP/Mum2p family

    4. XM_038526472.1 → XP_038382400.1  pre-mRNA-splicing regulator WTAP isoform X4

      UniProtKB/TrEMBL
      A0A8C0RJM3, A0A8I3MIW9
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    5. XM_038526475.1 → XP_038382403.1  pre-mRNA-splicing regulator WTAP isoform X4

      UniProtKB/TrEMBL
      A0A8C0RJM3, A0A8I3MIW9
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    6. XM_038526473.1 → XP_038382401.1  pre-mRNA-splicing regulator WTAP isoform X4

      UniProtKB/TrEMBL
      A0A8C0RJM3, A0A8I3MIW9
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    7. XM_038526474.1 → XP_038382402.1  pre-mRNA-splicing regulator WTAP isoform X4

      UniProtKB/TrEMBL
      A0A8C0RJM3, A0A8I3MIW9
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      49818344..49846503
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038527426.1 → XP_038383354.1  pre-mRNA-splicing regulator WTAP isoform X1

      UniProtKB/TrEMBL
      A0A8C0RJM3, A0A8I3MIW9
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    2. XM_038527674.1 → XP_038383602.1  pre-mRNA-splicing regulator WTAP isoform X3

      UniProtKB/TrEMBL
      A0A8C0RID4
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 150
      Wtap; WTAP/Mum2p family

    3. XM_533464.7 → XP_533464.4  pre-mRNA-splicing regulator WTAP isoform X2

      See identical proteins and their annotated locations for XP_533464.4

      UniProtKB/TrEMBL
      A0A8C0R5M0, A0A8C0TN68, A0A8I3N018
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 150
      Wtap; WTAP/Mum2p family

    4. XM_005615555.4 → XP_005615612.1  pre-mRNA-splicing regulator WTAP isoform X1

      See identical proteins and their annotated locations for XP_005615612.1

      UniProtKB/TrEMBL
      A0A8C0RJM3, A0A8I3MIW9
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    5. XM_022418603.2 → XP_022274311.1  pre-mRNA-splicing regulator WTAP isoform X1

      UniProtKB/TrEMBL
      A0A8C0RJM3, A0A8I3MIW9
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    6. XM_038527296.1 → XP_038383224.1  pre-mRNA-splicing regulator WTAP isoform X1

      UniProtKB/TrEMBL
      A0A8C0RJM3, A0A8I3MIW9
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family

    7. XM_005615556.4 → XP_005615613.1  pre-mRNA-splicing regulator WTAP isoform X1

      See identical proteins and their annotated locations for XP_005615613.1

      UniProtKB/TrEMBL
      A0A8C0RJM3, A0A8I3MIW9
      Conserved Domains (1) summary
      pfam17098
      Location:68 → 222
      Wtap; WTAP/Mum2p family
    Nucleotide Protein
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