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    RNF180 ring finger protein 180 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 471823, updated on 3-Apr-2024

    Summary

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    Official Symbol
    RNF180provided by VGNC
    Official Full Name
    ring finger protein 180provided by VGNC
    Primary source
    VGNC:VGNC:13580
    Locus tag
    CK820_G0034303
    See related
    Ensembl:ENSPTRG00000016919
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 4 NC_072402.2 (50265041..50478782, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 5 NC_072403.1 (50680425..50894120, complement)

    Chromosome 4 - NC_072402.2Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein mL49-like Neighboring gene U6 spliceosomal RNA Neighboring gene regulator of G protein signaling 7 binding protein Neighboring gene uncharacterized LOC129144137 Neighboring gene 5-hydroxytryptamine receptor 1A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin conjugating enzyme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in norepinephrine metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in serotonin metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RING finger protein 180; E3 ubiquitin-protein ligase RNF180

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072402.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      50265041..50478782 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063811210.1 → XP_063667280.1  E3 ubiquitin-protein ligase RNF180 isoform X4

    2. XM_063811209.1 → XP_063667279.1  E3 ubiquitin-protein ligase RNF180 isoform X3

    3. XM_527201.9 → XP_527201.7  E3 ubiquitin-protein ligase RNF180 isoform X2

      UniProtKB/TrEMBL
      K7B3Z1

    4. XM_054684342.2 → XP_054540317.1  E3 ubiquitin-protein ligase RNF180 isoform X1

    5. XM_054684343.2 → XP_054540318.1  E3 ubiquitin-protein ligase RNF180 isoform X1

    6. XM_063811211.1 → XP_063667281.1  E3 ubiquitin-protein ligase RNF180 isoform X5

    Nucleotide Protein
    Heading Accession and Version

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