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    UFL1 UFM1 specific ligase 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 462889, updated on 29-Mar-2024

    Summary

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    Official Symbol
    UFL1provided by VGNC
    Official Full Name
    UFM1 specific ligase 1provided by VGNC
    Primary source
    VGNC:VGNC:8572
    Locus tag
    CK820_G0000708
    See related
    Ensembl:ENSPTRG00000018432
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See UFL1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 5 NC_072403.2 (108461073..108495065)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 6 NC_072404.1 (108460076..108493547)

    Chromosome 5 - NC_072403.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112209483 Neighboring gene mannosidase endo-alpha Neighboring gene fucosyltransferase 9 Neighboring gene uncharacterized LOC104006929 Neighboring gene U4 spliceosomal RNA Neighboring gene four and a half LIM domains 5 Neighboring gene small ribosomal subunit protein eS7-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • KIAA0776

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UFM1 ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein K69-linked ufmylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to endoplasmic reticulum stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 UFM1-protein ligase 1
    XP_016811503.1
    XP_063669349.1
    XP_518643.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      108461073..108495065
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_518643.8 → XP_518643.2  E3 UFM1-protein ligase 1 isoform X1

      See identical proteins and their annotated locations for XP_518643.2

      UniProtKB/TrEMBL
      A0A2I3STM4, A0A2J8PV47, A0A6D2W1E5, H2QTF3
      Related
      ENSPTRP00000031486.4
      Conserved Domains (1) summary
      pfam09743
      Location:7 → 275
      DUF2042; Uncharacterized conserved protein (DUF2042)

    2. XM_063813279.1 → XP_063669349.1  E3 UFM1-protein ligase 1 isoform X3

    3. XM_016956014.4 → XP_016811503.1  E3 UFM1-protein ligase 1 isoform X2

      UniProtKB/TrEMBL
      A0A2I3STM4
    Nucleotide Protein
    Heading Accession and Version

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