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    TRPC1 transient receptor potential cation channel subfamily C member 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 460747, updated on 3-Apr-2024

    Summary

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    Official Symbol
    TRPC1provided by VGNC
    Official Full Name
    transient receptor potential cation channel subfamily C member 1provided by VGNC
    Primary source
    VGNC:VGNC:8016
    Locus tag
    CK820_G0006466
    See related
    Ensembl:ENSPTRG00000015485
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See TRPC1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (145934528..146018102)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (145844121..145927471)

    Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 2-alpha kinase 1-like Neighboring gene ATR serine/threonine kinase Neighboring gene plastin 1 Neighboring gene U7 small nuclear RNA Neighboring gene large ribosomal subunit protein uL2-like Neighboring gene procollagen C-endopeptidase enhancer 2 Neighboring gene uncharacterized LOC104005774

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables inositol 1,4,5 trisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables store-operated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cytosolic calcium ion concentration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cation channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    short transient receptor potential channel 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      145934528..146018102
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003950208.6 → XP_003950257.2  short transient receptor potential channel 1 isoform X1

    2. XM_003310031.7 → XP_003310079.2  short transient receptor potential channel 1 isoform X2

      UniProtKB/TrEMBL
      K7B0E1

    3. XM_054681134.2 → XP_054537109.1  short transient receptor potential channel 1 isoform X4

    4. XM_016942103.4 → XP_016797592.2  short transient receptor potential channel 1 isoform X5

    5. XM_054681135.2 → XP_054537110.1  short transient receptor potential channel 1 isoform X7

    6. XM_009446599.5 → XP_009444874.2  short transient receptor potential channel 1 isoform X6

    7. XM_054681136.2 → XP_054537111.1  short transient receptor potential channel 1 isoform X8

    8. XM_054681133.1 → XP_054537108.1  short transient receptor potential channel 1 isoform X3

    9. XM_054681137.2 → XP_054537112.1  short transient receptor potential channel 1 isoform X9

    Nucleotide Protein
    Heading Accession and Version

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