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    TRANK1 tetratricopeptide repeat and ankyrin repeat containing 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 460260, updated on 29-Mar-2024

    Summary

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    Official Symbol
    TRANK1provided by VGNC
    Official Full Name
    tetratricopeptide repeat and ankyrin repeat containing 1provided by VGNC
    Primary source
    VGNC:VGNC:2621
    Locus tag
    CK820_G0009049
    See related
    Ensembl:ENSPTRG00000014741
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (40837453..40955981, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (40832648..40955651, complement)

    Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene doublecortin like kinase 3 Neighboring gene 60 kDa heat shock protein, mitochondrial-like Neighboring gene chromobox protein homolog 3-like Neighboring gene U6atac minor spliceosomal RNA Neighboring gene protease-associated domain-containing protein 1-like Neighboring gene EPM2A interacting protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TPR and ankyrin repeat-containing protein 1
    Names
    lupus brain antigen 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      40837453..40955981 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009445153.5 → XP_009443428.3  TPR and ankyrin repeat-containing protein 1

      UniProtKB/TrEMBL
      A0A2J8NQ69, A0A2J8NQ71
      Conserved Domains (4) summary
      cd00204
      Location:514 → 633
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00006
      Location:15 → 43
      TPR; TPR repeat [structural motif]
      sd00045
      Location:541 → 588
      ANK; ANK repeat [structural motif]
      cl26005
      Location:13 → 120
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
    Nucleotide Protein
    Heading Accession and Version

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