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    TRIM45 tripartite motif containing 45 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 457158, updated on 3-Apr-2024

    Summary

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    Official Symbol
    TRIM45provided by VGNC
    Official Full Name
    tripartite motif containing 45provided by VGNC
    Primary source
    VGNC:VGNC:1701
    Locus tag
    CK820_G0044263
    See related
    Ensembl:ENSPTRG00000001163
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (114337706..114349203, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (117001251..117012033)

    Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene CD101 molecule Neighboring gene transcription termination factor 2 Neighboring gene microRNA mir-942 Neighboring gene small ribosomal subunit protein uS8-like Neighboring gene V-set domain containing T cell activation inhibitor 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tripartite motif-containing protein 45; E3 ubiquitin-protein ligase TRIM45

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      114337706..114349203 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063797983.1 → XP_063654053.1  E3 ubiquitin-protein ligase TRIM45 isoform X4

    2. XM_063797972.1 → XP_063654042.1  E3 ubiquitin-protein ligase TRIM45 isoform X3

    3. XM_063797973.1 → XP_063654043.1  E3 ubiquitin-protein ligase TRIM45 isoform X4

    4. XM_063797988.1 → XP_063654058.1  E3 ubiquitin-protein ligase TRIM45 isoform X4

    5. XM_063797981.1 → XP_063654051.1  E3 ubiquitin-protein ligase TRIM45 isoform X4

    6. XM_063797975.1 → XP_063654045.1  E3 ubiquitin-protein ligase TRIM45 isoform X4

    7. XM_063797971.1 → XP_063654041.1  E3 ubiquitin-protein ligase TRIM45 isoform X2

    8. XM_001145514.7 → XP_001145514.3  E3 ubiquitin-protein ligase TRIM45 isoform X1

      UniProtKB/TrEMBL
      K7D444

    RNA

    1. XR_010152714.1 RNA Sequence

    2. XR_010152706.1 RNA Sequence

    3. XR_010152710.1 RNA Sequence

    4. XR_010152715.1 RNA Sequence

    5. XR_010152705.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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