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    KHDRBS1 KH RNA binding domain containing, signal transduction associated 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 456705, updated on 29-Mar-2024

    Summary

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    Official Symbol
    KHDRBS1provided by VGNC
    Official Full Name
    KH RNA binding domain containing, signal transduction associated 1provided by VGNC
    Primary source
    VGNC:VGNC:8349
    Locus tag
    CK820_G0051970
    See related
    Ensembl:ENSPTRG00000000469
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (198915219..198963025, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (32334454..32384075)

    Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene karyopherin subunit alpha 6 Neighboring gene transmembrane protein 39B Neighboring gene uncharacterized LOC129136804 Neighboring gene protein tyrosine phosphatase 4A2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables poly(A) binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of alternative mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    KH domain-containing, RNA-binding, signal transduction-associated protein 1
    Names
    KH domain containing, RNA binding, signal transduction associated 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      198915219..198963025 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_513273.9 → XP_513273.3  KH domain-containing, RNA-binding, signal transduction-associated protein 1

      See identical proteins and their annotated locations for XP_513273.3

      UniProtKB/TrEMBL
      A0A2J8IYS8, A0A6D2X879, H2PYJ6
      Related
      ENSPTRP00000000822.2
      Conserved Domains (3) summary
      pfam16274
      Location:102 → 153
      Qua1; Qua1 domain
      pfam16568
      Location:366 → 415
      Sam68-YY; Tyrosine-rich domain of Sam68
      cd22468
      Location:152 → 257
      KH-I_KHDRBS1; type I K homology (KH) RNA-binding domain found in KH domain-containing, RNA-binding, signal transduction-associated protein 1 (KHDRBS1) and similar proteins

    RNA

    1. XR_681249.5 RNA Sequence

    2. XR_010147337.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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