U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    RUNX3 RUNX family transcription factor 3 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 456633, updated on 3-Apr-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    RUNX3provided by VGNC
    Official Full Name
    RUNX family transcription factor 3provided by VGNC
    Primary source
    VGNC:VGNC:6989
    Locus tag
    CK820_G0041576
    See related
    Ensembl:ENSPTRG00000000351
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (206051072..206117208)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (25182086..25213110, complement)

    Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107973892 Neighboring gene uncharacterized LOC129136594 Neighboring gene uncharacterized LOC134809300 Neighboring gene uncharacterized LOC129136587 Neighboring gene chloride intracellular channel 4 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chondrocyte differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in hemopoiesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ossification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    runt-related transcription factor 3
    Names
    runt related transcription factor 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      206051072..206117208
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063804208.1 → XP_063660278.1  runt-related transcription factor 3 isoform X1

      UniProtKB/TrEMBL
      A0A2J8K3P9, A0A6D2VZF1, H2PYC3

    2. XM_063804224.1 → XP_063660294.1  runt-related transcription factor 3 isoform X2

    3. XM_063804200.1 → XP_063660270.1  runt-related transcription factor 3 isoform X1

      UniProtKB/TrEMBL
      A0A2J8K3P9, A0A6D2VZF1, H2PYC3

    4. XM_063804195.1 → XP_063660265.1  runt-related transcription factor 3 isoform X1

      UniProtKB/TrEMBL
      A0A2J8K3P9, A0A6D2VZF1, H2PYC3

    5. XM_016956519.3 → XP_016812008.3  runt-related transcription factor 3 isoform X1

      UniProtKB/TrEMBL
      A0A2J8K3P9, A0A6D2VZF1, H2PYC3

    6. XM_063804223.1 → XP_063660293.1  runt-related transcription factor 3 isoform X2

    7. XM_063804214.1 → XP_063660284.1  runt-related transcription factor 3 isoform X2

    8. XM_063804205.1 → XP_063660275.1  runt-related transcription factor 3 isoform X1

      UniProtKB/TrEMBL
      A0A2J8K3P9, A0A6D2VZF1, H2PYC3

    9. XM_063804220.1 → XP_063660290.1  runt-related transcription factor 3 isoform X2

    10. XM_063804218.1 → XP_063660288.1  runt-related transcription factor 3 isoform X2

    11. XM_063804206.1 → XP_063660276.1  runt-related transcription factor 3 isoform X1

      UniProtKB/TrEMBL
      A0A2J8K3P9, A0A6D2VZF1, H2PYC3

    12. XM_009450941.4 → XP_009449216.3  runt-related transcription factor 3 isoform X2

    13. XM_063804212.1 → XP_063660282.1  runt-related transcription factor 3 isoform X1

      UniProtKB/TrEMBL
      A0A2J8K3P9, A0A6D2VZF1, H2PYC3

    14. XM_063804229.1 → XP_063660299.1  runt-related transcription factor 3 isoform X2

    15. XM_054663906.2 → XP_054519881.1  runt-related transcription factor 3 isoform X3

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Miscellaneous