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    NARF nuclear prelamin A recognition factor [ Pan troglodytes (chimpanzee) ]

    Gene ID: 454995, updated on 3-Apr-2024

    Summary

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    Official Symbol
    NARFprovided by VGNC
    Official Full Name
    nuclear prelamin A recognition factorprovided by VGNC
    Primary source
    VGNC:VGNC:9452
    Locus tag
    CK820_G0047910
    See related
    Ensembl:ENSPTRG00000009805
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See NARF in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 19 NC_072417.2 (95821344..95850508)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 17 NC_072415.1 (94004700..94034815)

    Chromosome 19 - NC_072417.2Genomic Context describing neighboring genes Neighboring gene 2-oxoglutarate and iron dependent oxygenase domain containing 3 Neighboring gene hexosaminidase D Neighboring gene uncharacterized LOC134808915 Neighboring gene cytochrome b-245 chaperone 1 Neighboring gene uncharacterized LOC112206098 Neighboring gene transfer RNA methionine (anticodon CAU)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Beyond DNA: RNA editing and steps toward Alu exonization in primates. Möller-Krull M, et al. J Mol Biol, 2008 Oct 10. PMID 18680752
    2. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lamin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in lamin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear prelamin A recognition factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072417.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      95821344..95850508
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016930987.4 → XP_016786476.1  nuclear prelamin A recognition factor isoform X1

      UniProtKB/TrEMBL
      A0A2J8JFA7, A0A6D2XJG2, H2QE54, K7ANC9, K7C5E9
      Related
      ENSPTRP00000016680.7
      Conserved Domains (2) summary
      smart00902
      Location:398 → 446
      Fe_hyd_SSU; Iron hydrogenase small subunit
      pfam02906
      Location:92 → 381
      Fe_hyd_lg_C; Iron only hydrogenase large subunit, C-terminal domain

    2. XM_063799459.1 → XP_063655529.1  nuclear prelamin A recognition factor isoform X3

      UniProtKB/TrEMBL
      G2HH00

    3. XM_063799458.1 → XP_063655528.1  nuclear prelamin A recognition factor isoform X3

      UniProtKB/TrEMBL
      G2HH00

    4. XM_024350786.3 → XP_024206554.1  nuclear prelamin A recognition factor isoform X2

      UniProtKB/TrEMBL
      K7C5E9
      Conserved Domains (2) summary
      smart00902
      Location:353 → 401
      Fe_hyd_SSU; Iron hydrogenase small subunit
      pfam02906
      Location:92 → 336
      Fe_hyd_lg_C; Iron only hydrogenase large subunit, C-terminal domain

    5. XM_063799460.1 → XP_063655530.1  nuclear prelamin A recognition factor isoform X4

    6. XM_063799461.1 → XP_063655531.1  nuclear prelamin A recognition factor isoform X4

    7. XM_054670280.1 → XP_054526255.1  nuclear prelamin A recognition factor isoform X3

      UniProtKB/TrEMBL
      G2HH00

    RNA

    1. XR_010153170.1 RNA Sequence

    2. XR_010153171.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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