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    RNF135 ring finger protein 135 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 454562, updated on 29-Mar-2024

    Summary

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    Official Symbol
    RNF135provided by VGNC
    Official Full Name
    ring finger protein 135provided by VGNC
    Primary source
    VGNC:VGNC:9565
    Locus tag
    CK820_G0028564
    See related
    Ensembl:ENSPTRG00000008967
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 17
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 19 NC_072417.2 (36652482..36678882, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 17 NC_072415.1 (34836939..34863326, complement)

    Chromosome 19 - NC_072417.2Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat-containing protein 37B-like Neighboring gene uncharacterized LOC104002875 Neighboring gene divergent paired-related homeobox-like Neighboring gene ArfGAP with dual PH domains 2 Neighboring gene transcription elongation factor, mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribonucleoprotein complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin-protein transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RING finger protein 135; E3 ubiquitin-protein ligase RNF135

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072417.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      36652482..36678882 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_511391.8 → XP_511391.2  E3 ubiquitin-protein ligase RNF135 isoform X4

      UniProtKB/TrEMBL
      A0A2I3SNZ3, A0A2J8LIU1, A0A6D2XFV2
      Related
      ENSPTRP00000078690.1
      Conserved Domains (1) summary
      cd16543
      Location:25 → 67
      RING-HC_RNF135_like; RING finger, HC subclass, found in RING finger protein 135 (RNF135), tripartite motif-containing protein 15 (TRIM15) and similar proteins

    2. XM_001174802.7 → XP_001174802.1  E3 ubiquitin-protein ligase RNF135 isoform X1

      See identical proteins and their annotated locations for XP_001174802.1

      UniProtKB/TrEMBL
      A0A2J8LIS9, A0A6D2YB99, H2QCL9
      Related
      ENSPTRP00000015306.3
      Conserved Domains (2) summary
      cd12902
      Location:265 → 432
      SPRY_PRY_RNF135; PRY/SPRY domain in RING finger protein RNF135
      cd16543
      Location:25 → 67
      RING-HC_RNF135_like; RING finger, HC subclass, found in RING finger protein 135 (RNF135), tripartite motif-containing protein 15 (TRIM15) and similar proteins

    3. XM_001174801.7 → XP_001174801.1  E3 ubiquitin-protein ligase RNF135 isoform X3

      UniProtKB/TrEMBL
      A0A2I3TDB6, A0A2J8LIT9, A0A6D2XCA8
      Related
      ENSPTRP00000087245.1
      Conserved Domains (1) summary
      cd16543
      Location:25 → 67
      RING-HC_RNF135_like; RING finger, HC subclass, found in RING finger protein 135 (RNF135), tripartite motif-containing protein 15 (TRIM15) and similar proteins

    4. XM_054670085.2 → XP_054526060.1  E3 ubiquitin-protein ligase RNF135 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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