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    XYLT1 xylosyltransferase 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 453955, updated on 3-Apr-2024

    Summary

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    Official Symbol
    XYLT1provided by VGNC
    Official Full Name
    xylosyltransferase 1provided by VGNC
    Primary source
    VGNC:VGNC:5958
    Locus tag
    CK820_G0050393
    See related
    Ensembl:ENSPTRG00000007819
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Also known as
    XT-I
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 16
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 18 NC_072416.2 (19609946..19977084, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 16 NC_072414.1 (19609952..19977087, complement)

    Chromosome 18 - NC_072416.2Genomic Context describing neighboring genes Neighboring gene BOS complex subunit NOMO3 Neighboring gene polycystin-1 Neighboring gene uncharacterized LOC104002540 Neighboring gene SREBP regulating gene protein-like Neighboring gene large ribosomal subunit protein uL30-like Neighboring gene nuclear pore complex-interacting protein family member A9-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein xylosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in heparan sulfate proteoglycan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    xylosyltransferase 1
    Names
    UDP-D-xylose:proteoglycan core protein beta-D-xylosyltransferase
    peptide O-xylosyltransferase 1
    xylosyltransferase I
    NP_001032366.1
    XP_009428658.3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001037289.1 → NP_001032366.1  xylosyltransferase 1 precursor

      See identical proteins and their annotated locations for NP_001032366.1

      Status: PROVISIONAL

      Source sequence(s)
      AJ866718
      UniProtKB/Swiss-Prot
      Q5QQ57
      UniProtKB/TrEMBL
      A0A2J8J661, A0A6D2XTL9, H2QAN0
      Related
      ENSPTRP00000060146.2, ENSPTRT00000073395.2
      Conserved Domains (2) summary
      pfam02485
      Location:314 → 566
      Branch; Core-2/I-Branching enzyme
      pfam12529
      Location:599 → 779
      Xylo_C; Xylosyltransferase C terminal

    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072416.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      19609946..19977084 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009430383.5 → XP_009428658.3  xylosyltransferase 1 isoform X1

    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5QQ57.1 GenPept UniProtKB/Swiss-Prot:Q5QQ57

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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