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    ATG2B autophagy related 2B [ Pan troglodytes (chimpanzee) ]

    Gene ID: 453143, updated on 3-Apr-2024

    Summary

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    Official Symbol
    ATG2Bprovided by VGNC
    Official Full Name
    autophagy related 2Bprovided by VGNC
    Primary source
    VGNC:VGNC:3477
    Locus tag
    CK820_G0025030
    See related
    Ensembl:ENSPTRG00000006700
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 14
    Exon count:
    42
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 15 NC_072413.2 (94283318..94365379, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 14 NC_072412.1 (87586894..87669069, complement)

    Chromosome 15 - NC_072413.2Genomic Context describing neighboring genes Neighboring gene bradykinin receptor B2 Neighboring gene CDC28 protein kinase regulatory subunit 1B pseudogene Neighboring gene uncharacterized LOC101057353 Neighboring gene bradykinin receptor B1 Neighboring gene small nucleolar RNA U13 Neighboring gene U2 spliceosomal RNA Neighboring gene GSK3B interacting protein Neighboring gene phosphatidylethanolamine-binding protein 1-like Neighboring gene adenylate kinase 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-3-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in autophagosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in autophagy of mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in piecemeal microautophagy of the nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in reticulophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in phagophore assembly site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    autophagy-related protein 2 homolog B
    Names
    ATG2 autophagy related 2 homolog B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072413.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      94283318..94365379 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009428416.5 → XP_009426691.4  autophagy-related protein 2 homolog B isoform X2

    2. XM_510152.8 → XP_510152.6  autophagy-related protein 2 homolog B isoform X1

      UniProtKB/TrEMBL
      A0A2J8QMB1, A0A803KIM8, K7CQS5

    3. XM_063793117.1 → XP_063649187.1  autophagy-related protein 2 homolog B isoform X4

    4. XM_063793116.1 → XP_063649186.1  autophagy-related protein 2 homolog B isoform X3

    RNA

    1. XR_010151028.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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