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    SPART spartin [ Pan troglodytes (chimpanzee) ]

    Gene ID: 452538, updated on 3-Apr-2024

    Summary

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    Official Symbol
    SPARTprovided by VGNC
    Official Full Name
    spartinprovided by VGNC
    Primary source
    VGNC:VGNC:14856
    Locus tag
    CK820_G0019712
    See related
    Ensembl:ENSPTRG00000005782
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Also known as
    SPG20
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 13
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 14 NC_072412.2 (35412474..35479742, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 13 NC_072411.1 (30185157..30222557, complement)

    Chromosome 14 - NC_072412.2Genomic Context describing neighboring genes Neighboring gene spermatogenesis and oogenesis specific basic helix-loop-helix 2 Neighboring gene coiled-coil domain containing 169 Neighboring gene U6 spliceosomal RNA Neighboring gene putative uncharacterized protein SPART-AS1 Neighboring gene cyclin A1 Neighboring gene uncharacterized LOC129136817

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cell division IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of BMP signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    spartin
    Names
    spastic paraplegia 20 (Troyer syndrome)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072412.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      35412474..35479742 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063792054.1 → XP_063648124.1  spartin isoform X2

      UniProtKB/TrEMBL
      A0A2J8MLJ3, A0A6D2YB87, H2R0R5

    2. XM_063792048.1 → XP_063648118.1  spartin isoform X2

      UniProtKB/TrEMBL
      A0A2J8MLJ3, A0A6D2YB87, H2R0R5

    3. XM_063792046.1 → XP_063648116.1  spartin isoform X2

      UniProtKB/TrEMBL
      A0A2J8MLJ3, A0A6D2YB87, H2R0R5

    4. XM_063792047.1 → XP_063648117.1  spartin isoform X2

      UniProtKB/TrEMBL
      A0A2J8MLJ3, A0A6D2YB87, H2R0R5

    5. XM_063792050.1 → XP_063648120.1  spartin isoform X2

      UniProtKB/TrEMBL
      A0A2J8MLJ3, A0A6D2YB87, H2R0R5

    6. XM_063792049.1 → XP_063648119.1  spartin isoform X2

      UniProtKB/TrEMBL
      A0A2J8MLJ3, A0A6D2YB87, H2R0R5

    7. XM_063792045.1 → XP_063648115.1  spartin isoform X2

      UniProtKB/TrEMBL
      A0A2J8MLJ3, A0A6D2YB87, H2R0R5

    8. XM_063792053.1 → XP_063648123.1  spartin isoform X2

      UniProtKB/TrEMBL
      A0A2J8MLJ3, A0A6D2YB87, H2R0R5

    9. XM_063792052.1 → XP_063648122.1  spartin isoform X2

      UniProtKB/TrEMBL
      A0A2J8MLJ3, A0A6D2YB87, H2R0R5

    10. XM_054665182.2 → XP_054521157.1  spartin isoform X1

    11. XM_063792051.1 → XP_063648121.1  spartin isoform X2

      UniProtKB/TrEMBL
      A0A2J8MLJ3, A0A6D2YB87, H2R0R5
    Nucleotide Protein
    Heading Accession and Version

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