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    POLR2I RNA polymerase II subunit I [ Gallus gallus (chicken) ]

    Gene ID: 426289, updated on 5-Mar-2024

    Summary

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    Official Symbol
    POLR2Iprovided by CGNC
    Official Full Name
    RNA polymerase II subunit Iprovided by CGNC
    Primary source
    CGNC:10365
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 16
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 16 NC_052547.1 (898639..900442)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 16 NC_052588.1 (587187..589000)

    Chromosome 16 - NC_052547.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 239-like Neighboring gene zinc finger protein 226-like Neighboring gene zinc finger protein 664-like Neighboring gene olfactory receptor 14A16-like Neighboring gene uncharacterized LOC101750700 Neighboring gene olfactory receptor 14C36-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-directed 5'-3' RNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription initiation at RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transcription-coupled nucleotide-excision repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase II, core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-directed RNA polymerase II subunit RPB9
    Names
    DNA directed RNA polymerase II polypeptide I
    polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa
    polymerase (RNA) II subunit I
    XP_040541344.1
    XP_423952.3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052547.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      898639..900442
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_423952.8 → XP_423952.3  DNA-directed RNA polymerase II subunit RPB9

      UniProtKB/TrEMBL
      A0A1D5PEI0
      Conserved Domains (2) summary
      COG1594
      Location:19 → 130
      RPB9; DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS [Transcription]
      cd10508
      Location:79 → 129
      Zn-ribbon_RPB9; C-terminal zinc ribbon domain of RPB9 subunit of RNA polymerase II

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052588.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      587187..589000
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040685410.2 → XP_040541344.1  DNA-directed RNA polymerase II subunit RPB9

      Conserved Domains (2) summary
      COG1594
      Location:19 → 130
      RPB9; DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS [Transcription]
      cd10508
      Location:79 → 129
      Zn-ribbon_RPB9; C-terminal zinc ribbon domain of RPB9 subunit of RNA polymerase II
    Nucleotide Protein Strain
    Heading Accession and Version

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