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    BCAN brevican [ Gallus gallus (chicken) ]

    Gene ID: 425976, updated on 3-Apr-2024

    Summary

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    Official Symbol
    BCANprovided by CGNC
    Official Full Name
    brevicanprovided by CGNC
    Primary source
    CGNC:52630
    See related
    Ensembl:ENSGALG00010028339
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 25
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 25 NC_052556.1 (993636..1006242, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 25 NC_052597.1 (994744..1007352, complement)

    Chromosome 25 - NC_052556.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107055111 Neighboring gene microRNA mir-9-4 Neighboring gene Rh family B glycoprotein Neighboring gene hyaluronan and proteoglycan link protein 2 Neighboring gene nestin Neighboring gene dnaJ homolog subfamily A member 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hyaluronic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    brevican core protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052556.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      993636..1006242 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015298416.3 → XP_015153902.2  brevican core protein isoform X2

      UniProtKB/TrEMBL
      A0A8V1ADE9
      Related
      ENSGALP00010042192.1, ENSGALT00010068629.1
      Conserved Domains (7) summary
      cd00033
      Location:874 → 931
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00409
      Location:42 → 158
      IG; Immunoglobulin
      PHA03247
      Location:423 → 724
      PHA03247; large tegument protein UL36; Provisional
      cd00054
      Location:711 → 741
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd03517
      Location:161 → 255
      Link_domain_CSPGs_modules_1_3; this extracellular link domain is found in the first and third link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan. In addition, it is found in the first link module of three other CSPGs: versican, neurocan, and brevican. ...
      cd03520
      Location:262 → 357
      Link_domain_CSPGs_modules_2_4; this link domain is found in the second and fourth link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan and, in the second link module of three other CSPGs: versican, neurocan, and brevican. The link domain is a hyaluronan ...
      cl02432
      Location:747 → 870
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

    2. XM_046903978.1 → XP_046759934.1  brevican core protein isoform X3

      Related
      ENSGALP00010042195.1, ENSGALT00010068637.1

    3. XM_015298413.4 → XP_015153899.2  brevican core protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1ADE9
      Conserved Domains (7) summary
      cd00033
      Location:945 → 1002
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00409
      Location:113 → 229
      IG; Immunoglobulin
      PHA03247
      Location:494 → 795
      PHA03247; large tegument protein UL36; Provisional
      cd00054
      Location:782 → 812
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd03517
      Location:232 → 326
      Link_domain_CSPGs_modules_1_3; this extracellular link domain is found in the first and third link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan. In addition, it is found in the first link module of three other CSPGs: versican, neurocan, and brevican. ...
      cd03520
      Location:333 → 428
      Link_domain_CSPGs_modules_2_4; this link domain is found in the second and fourth link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan and, in the second link module of three other CSPGs: versican, neurocan, and brevican. The link domain is a hyaluronan ...
      cl02432
      Location:818 → 941
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052597.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      994744..1007352 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040690958.2 → XP_040546892.1  brevican core protein isoform X2

      UniProtKB/TrEMBL
      A0A8V1ADE9
      Conserved Domains (7) summary
      cd00033
      Location:874 → 931
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00409
      Location:42 → 158
      IG; Immunoglobulin
      PHA03247
      Location:423 → 724
      PHA03247; large tegument protein UL36; Provisional
      cd00054
      Location:711 → 741
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd03517
      Location:161 → 255
      Link_domain_CSPGs_modules_1_3; this extracellular link domain is found in the first and third link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan. In addition, it is found in the first link module of three other CSPGs: versican, neurocan, and brevican. ...
      cd03520
      Location:262 → 357
      Link_domain_CSPGs_modules_2_4; this link domain is found in the second and fourth link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan and, in the second link module of three other CSPGs: versican, neurocan, and brevican. The link domain is a hyaluronan ...
      cl02432
      Location:747 → 870
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

    2. XM_046932812.1 → XP_046788768.1  brevican core protein isoform X3

    3. XM_040690957.2 → XP_040546891.1  brevican core protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1ADE9
      Conserved Domains (7) summary
      cd00033
      Location:945 → 1002
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
      smart00409
      Location:113 → 229
      IG; Immunoglobulin
      PHA03247
      Location:494 → 795
      PHA03247; large tegument protein UL36; Provisional
      cd00054
      Location:782 → 812
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd03517
      Location:232 → 326
      Link_domain_CSPGs_modules_1_3; this extracellular link domain is found in the first and third link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan. In addition, it is found in the first link module of three other CSPGs: versican, neurocan, and brevican. ...
      cd03520
      Location:333 → 428
      Link_domain_CSPGs_modules_2_4; this link domain is found in the second and fourth link modules of the chondroitin sulfate proteoglycan core protein (CSPG) aggrecan and, in the second link module of three other CSPGs: versican, neurocan, and brevican. The link domain is a hyaluronan ...
      cl02432
      Location:818 → 941
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    Nucleotide Protein
    Heading Accession and Version

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