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    IGSF9 immunoglobulin superfamily member 9 [ Gallus gallus (chicken) ]

    Gene ID: 425454, updated on 5-Mar-2024

    Summary

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    Symbol
    IGSF9provided by CGNC
    Full Name
    immunoglobulin superfamily member 9provided by CGNC
    Primary source
    CGNC:15534
    See related
    Ensembl:ENSGALG00010028878
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 25
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 25 NC_052556.1 (2435536..2446412)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 25 NC_052597.1 (2569648..2578029)

    Chromosome 25 - NC_052556.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121112069 Neighboring gene C-reactive protein like 2 Neighboring gene dual specificity phosphatase 23 Neighboring gene uncharacterized LOC112530313 Neighboring gene transgelin 2 Neighboring gene cilia and flagella associated protein 45

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein turtle homolog A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052556.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      2435536..2446412
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040652639.2 → XP_040508573.1  protein turtle homolog A isoform X1

      UniProtKB/TrEMBL
      A0A8V1AFU3
      Related
      ENSGALP00010042972.1, ENSGALT00010069846.1
      Conserved Domains (6) summary
      smart00408
      Location:149 → 209
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:229 → 315
      IG; Immunoglobulin
      smart00410
      Location:22 → 107
      IG_like; Immunoglobulin like
      cd00063
      Location:621 → 711
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd00096
      Location:151 → 155
      Ig; Ig strand B [structural motif]
      cl11960
      Location:337 → 398
      Ig; Immunoglobulin domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052597.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      2569648..2578029
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040690801.2 → XP_040546735.1  protein turtle homolog A isoform X3

      Conserved Domains (5) summary
      smart00408
      Location:149 → 209
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:229 → 315
      IG; Immunoglobulin
      cd00063
      Location:621 → 711
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd00096
      Location:150 → 158
      Ig; Ig strand B [structural motif]
      cl11960
      Location:337 → 398
      Ig; Immunoglobulin domain

    2. XM_040690800.2 → XP_040546734.1  protein turtle homolog A isoform X2

      Conserved Domains (6) summary
      smart00408
      Location:149 → 209
      IGc2; Immunoglobulin C-2 Type
      smart00409
      Location:229 → 315
      IG; Immunoglobulin
      smart00410
      Location:22 → 107
      IG_like; Immunoglobulin like
      cd00063
      Location:621 → 711
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd00096
      Location:150 → 158
      Ig; Ig strand B [structural motif]
      cl11960
      Location:337 → 398
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

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