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    TTC21B tetratricopeptide repeat domain 21B [ Gallus gallus (chicken) ]

    Gene ID: 424176, updated on 5-Mar-2024

    Summary

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    Symbol
    TTC21Bprovided by CGNC
    Full Name
    tetratricopeptide repeat domain 21Bprovided by CGNC
    Primary source
    CGNC:8325
    See related
    Ensembl:ENSGALG00010025541
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 7
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 7 NC_052538.1 (19278140..19311334)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 7 NC_052579.1 (19193840..19226788)

    Chromosome 7 - NC_052538.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121111332 Neighboring gene sodium voltage-gated channel alpha subunit 9 Neighboring gene sodium voltage-gated channel alpha subunit 1 Neighboring gene uncharacterized LOC121113405 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 3 Neighboring gene cysteine and serine rich nuclear protein 3 Neighboring gene uncharacterized LOC107053842

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables identical protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intraciliary retrograde transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of intraciliary transport particle A IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tetratricopeptide repeat protein 21B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052538.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      19278140..19311334
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_422022.7 → XP_422022.4  tetratricopeptide repeat protein 21B isoform X1

      UniProtKB/TrEMBL
      A0A8V1A5N0, A0A8V1A5N5
      Related
      ENSGALP00010038522.1, ENSGALT00010062319.1

    2. XM_040704210.2 → XP_040560144.1  tetratricopeptide repeat protein 21B isoform X2

      UniProtKB/TrEMBL
      A0A8V1A5N0
      Conserved Domains (3) summary
      TIGR00990
      Location:126 → 461
      3a0801s09; mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)
      TIGR02917
      Location:379 → 1114
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:787 → 815
      TPR; TPR repeat [structural motif]

    3. XM_040704211.2 → XP_040560145.1  tetratricopeptide repeat protein 21B isoform X3

      UniProtKB/TrEMBL
      A0A8V1A3B8, A0A8V1A5N0
      Related
      ENSGALP00010038520.1, ENSGALT00010062315.1
      Conserved Domains (3) summary
      TIGR00990
      Location:44 → 379
      3a0801s09; mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)
      TIGR02917
      Location:297 → 1032
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:705 → 733
      TPR; TPR repeat [structural motif]

    4. XM_015289741.3 → XP_015145227.2  tetratricopeptide repeat protein 21B isoform X4

      UniProtKB/TrEMBL
      A0A8V1A5N0
      Conserved Domains (2) summary
      TIGR02917
      Location:144 → 879
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:552 → 580
      TPR; TPR repeat [structural motif]

    RNA

    1. XR_005861702.2 RNA Sequence

    2. XR_005861701.2 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052579.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      19193840..19226788
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040676793.1 → XP_040532727.1  tetratricopeptide repeat protein 21B isoform X1

      UniProtKB/TrEMBL
      A0A8V1A5N0
      Conserved Domains (3) summary
      TIGR00990
      Location:126 → 461
      3a0801s09; mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)
      TIGR02917
      Location:379 → 1114
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:787 → 815
      TPR; TPR repeat [structural motif]

    2. XM_040676794.2 → XP_040532728.1  tetratricopeptide repeat protein 21B isoform X2

      UniProtKB/TrEMBL
      A0A8V1A5N0
      Conserved Domains (3) summary
      TIGR00990
      Location:126 → 461
      3a0801s09; mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)
      TIGR02917
      Location:379 → 1114
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:787 → 815
      TPR; TPR repeat [structural motif]

    3. XM_040676795.2 → XP_040532729.1  tetratricopeptide repeat protein 21B isoform X3

      UniProtKB/TrEMBL
      A0A8V1A5N0
      Conserved Domains (3) summary
      TIGR00990
      Location:44 → 379
      3a0801s09; mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)
      TIGR02917
      Location:297 → 1032
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:705 → 733
      TPR; TPR repeat [structural motif]

    4. XM_040676796.1 → XP_040532730.1  tetratricopeptide repeat protein 21B isoform X4

      UniProtKB/TrEMBL
      A0A8V1A5N0
      Conserved Domains (2) summary
      TIGR02917
      Location:144 → 879
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:552 → 580
      TPR; TPR repeat [structural motif]

    RNA

    1. XR_005851979.2 RNA Sequence

    2. XR_005851978.2 RNA Sequence

    Nucleotide Protein
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