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    CDH19 cadherin 19 [ Gallus gallus (chicken) ]

    Gene ID: 421029, updated on 3-Apr-2024

    Summary

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    Symbol
    CDH19provided by CGNC
    Full Name
    cadherin 19provided by CGNC
    Primary source
    CGNC:10314
    See related
    Ensembl:ENSGALG00010001487
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    cad19; cadherin19; cadherin-19
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (94733460..94840577)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (94808541..94915638)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121109733 Neighboring gene uncharacterized LOC121109734 Neighboring gene uncharacterized LOC121109735 Neighboring gene cadherin 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cadherin-19 expression is restricted to myelin-forming cells in the chicken embryo. Lin J, et al. Neuroscience, 2010 Jan 13. PMID 19850111
    2. Cadherin expression in the developing chicken cochlea. Luo J, et al. Dev Dyn, 2007 Aug. PMID 17654718

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Cdh19 is expressed by Schwann cells and oligodendrocytes in chicken
      Title: Cadherin-19 expression is restricted to myelin-forming cells in the chicken embryo.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cadherin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in adherens junction organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell junction assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of catenin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cadherin-19
    Names
    cadherin 19, type 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001100287.2 → NP_001093757.1  cadherin-19 precursor

      See identical proteins and their annotated locations for NP_001093757.1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000042
      UniProtKB/TrEMBL
      A0A8V0XBM4, A6YJX3
      Related
      ENSGALP00010001880.1, ENSGALT00010003437.1
      Conserved Domains (2) summary
      cd11304
      Location:152 → 252
      Cadherin_repeat; Cadherin tandem repeat domain
      pfam01049
      Location:623 → 768
      Cadherin_C; Cadherin cytoplasmic region

    2. NM_001396660.1 → NP_001383589.1  cadherin-19 precursor

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000042
      UniProtKB/TrEMBL
      A0A8V0XBM4, A6YJX3
      Conserved Domains (2) summary
      cd11304
      Location:152 → 252
      Cadherin_repeat; Cadherin tandem repeat domain
      pfam01049
      Location:623 → 768
      Cadherin_C; Cadherin cytoplasmic region

    3. NM_001396661.1 → NP_001383590.1  cadherin-19 precursor

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000042
      UniProtKB/TrEMBL
      A0A8V0XBM4, A6YJX3
      Related
      ENSGALP00010001882.1, ENSGALT00010003439.1
      Conserved Domains (2) summary
      cd11304
      Location:152 → 252
      Cadherin_repeat; Cadherin tandem repeat domain
      pfam01049
      Location:623 → 768
      Cadherin_C; Cadherin cytoplasmic region

    4. NM_001396662.1 → NP_001383591.1  cadherin-19 precursor

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000042
      UniProtKB/TrEMBL
      A0A8V0XBM4, A6YJX3
      Conserved Domains (2) summary
      cd11304
      Location:152 → 252
      Cadherin_repeat; Cadherin tandem repeat domain
      pfam01049
      Location:623 → 768
      Cadherin_C; Cadherin cytoplasmic region

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      94733460..94840577
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046925061.1 → XP_046781017.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    2. XM_040684834.2 → XP_040540768.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XBM4, A6YJX3
      Conserved Domains (2) summary
      cd11304
      Location:152 → 252
      Cadherin_repeat; Cadherin tandem repeat domain
      pfam01049
      Location:623 → 768
      Cadherin_C; Cadherin cytoplasmic region

    3. XM_046925060.1 → XP_046781016.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    4. XM_046925039.1 → XP_046780995.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    5. XM_025147295.3 → XP_025003063.2  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XBM4, A6YJX3
      Conserved Domains (2) summary
      cd11304
      Location:152 → 252
      Cadherin_repeat; Cadherin tandem repeat domain
      pfam01049
      Location:623 → 768
      Cadherin_C; Cadherin cytoplasmic region

    6. XM_046925035.1 → XP_046780991.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    7. XM_046925065.1 → XP_046781021.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    8. XM_046925045.1 → XP_046781001.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    9. XM_046925047.1 → XP_046781003.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    10. XM_046925057.1 → XP_046781013.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    11. XM_046925058.1 → XP_046781014.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    12. XM_046925055.1 → XP_046781011.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      94808541..94915638
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046911508.1 → XP_046767464.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    2. XM_046911500.1 → XP_046767456.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    3. XM_046911507.1 → XP_046767463.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    4. XM_046911499.1 → XP_046767455.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    5. XM_046911501.1 → XP_046767457.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    6. XM_046911498.1 → XP_046767454.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    7. XM_046911509.1 → XP_046767465.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    8. XM_046911502.1 → XP_046767458.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    9. XM_046911503.1 → XP_046767459.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    10. XM_046911505.1 → XP_046767461.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    11. XM_046911506.1 → XP_046767462.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3

    12. XM_046911504.1 → XP_046767460.1  cadherin-19 isoform X1

      UniProtKB/TrEMBL
      A6YJX3
    Nucleotide Protein
    Heading Accession and Version

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