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    TGM4 transglutaminase 4 [ Gallus gallus (chicken) ]

    Gene ID: 420706, updated on 3-Apr-2024

    Summary

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    Symbol
    TGM4provided by CGNC
    Full Name
    transglutaminase 4provided by CGNC
    Primary source
    CGNC:51321
    See related
    Ensembl:ENSGALG00010016030
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See TGM4 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (43072803..43083292, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (43123518..43134030, complement)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene CUB domain containing protein 1 Neighboring gene exosome component 7 Neighboring gene zinc finger DHHC-type containing 3 Neighboring gene transmembrane protein 42 Neighboring gene kinesin family member 15

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-glutamine gamma-glutamyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptide cross-linking IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in collagen-containing extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein-glutamine gamma-glutamyltransferase 4
    Names
    transglutaminase 4 (prostate)
    NP_001006368.2
    XP_025002990.1
    XP_046767199.1
    XP_046767200.1
    XP_046767201.1
    XP_046779319.1
    XP_046779322.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001006368.2 → NP_001006368.2  protein-glutamine gamma-glutamyltransferase 4

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000037
      UniProtKB/TrEMBL
      A0A1D5P5P9, Q5ZK99
      Related
      ENSGALP00010022330.1, ENSGALT00010038592.1
      Conserved Domains (1) summary
      smart00460
      Location:261 → 352
      TGc; Transglutaminase/protease-like homologues

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      43072803..43083292 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046923366.1 → XP_046779322.1  protein-glutamine gamma-glutamyltransferase 4 isoform X2

    2. XM_046923363.1 → XP_046779319.1  protein-glutamine gamma-glutamyltransferase 4 isoform X2

    3. XM_025147222.3 → XP_025002990.1  protein-glutamine gamma-glutamyltransferase 4 isoform X1

      UniProtKB/TrEMBL
      Q5ZK99
      Conserved Domains (3) summary
      smart00460
      Location:294 → 385
      TGc; Transglutaminase/protease-like homologues
      pfam00868
      Location:39 → 155
      Transglut_N; Transglutaminase family
      pfam00927
      Location:645 → 741
      Transglut_C; Transglutaminase family, C-terminal ig like domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      43123518..43134030 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046911245.1 → XP_046767201.1  protein-glutamine gamma-glutamyltransferase 4 isoform X2

    2. XM_046911244.1 → XP_046767200.1  protein-glutamine gamma-glutamyltransferase 4 isoform X2

    3. XM_046911243.1 → XP_046767199.1  protein-glutamine gamma-glutamyltransferase 4 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

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