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    STAU2 staufen double-stranded RNA binding protein 2 [ Gallus gallus (chicken) ]

    Gene ID: 420184, updated on 3-Apr-2024

    Summary

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    Symbol
    STAU2provided by CGNC
    Full Name
    staufen double-stranded RNA binding protein 2provided by CGNC
    Primary source
    CGNC:11665
    See related
    Ensembl:ENSGALG00010003733
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (117510044..117676523, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (117513770..117680074, complement)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121113132 Neighboring gene ribosomal protein L7 Neighboring gene retinol dehydrogenase 10 (all-trans) Neighboring gene uncharacterized LOC124417792 Neighboring gene ubiquitin conjugating enzyme E2 W (putative) Neighboring gene uncharacterized LOC121110105

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Fine mapping of the muscular dystrophy (AM) gene on chicken chromosome 2q. Yoshizawa K, et al. Anim Genet, 2004 Oct. PMID 15373744
    2. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    double-stranded RNA-binding protein Staufen homolog 2
    Names
    staufen homolog 2
    staufen, RNA binding protein, homolog 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001389389.2 → NP_001376318.2  double-stranded RNA-binding protein Staufen homolog 2 isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000043
      UniProtKB/TrEMBL
      A0A8V0XED3
      Related
      ENSGALP00010005054.1, ENSGALT00010008632.1
      Conserved Domains (5) summary
      pfam16482
      Location:528 → 633
      Staufen_C; Staufen C-terminal domain
      cd19880
      Location:75 → 142
      DSRM_STAU2_rpt1; first double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19882
      Location:170 → 251
      DSRM_STAU2_rpt2; second double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19884
      Location:278 → 344
      DSRM_STAU2_rpt3; third double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19886
      Location:376 → 461
      DSRM_STAU2_rpt4; fourth double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins

    2. NM_001389390.2 → NP_001376319.2  double-stranded RNA-binding protein Staufen homolog 2 isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000043
      UniProtKB/TrEMBL
      A0A8V0XAB1
      Related
      ENSGALP00010005056.1, ENSGALT00010008635.1
      Conserved Domains (5) summary
      pfam16482
      Location:528 → 595
      Staufen_C; Staufen C-terminal domain
      cd19880
      Location:75 → 142
      DSRM_STAU2_rpt1; first double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19882
      Location:170 → 251
      DSRM_STAU2_rpt2; second double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19884
      Location:278 → 344
      DSRM_STAU2_rpt3; third double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19886
      Location:376 → 461
      DSRM_STAU2_rpt4; fourth double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      117510044..117676523 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040677711.1 → XP_040533645.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XAB1
      Conserved Domains (5) summary
      pfam16482
      Location:528 → 595
      Staufen_C; Staufen C-terminal domain
      cd19880
      Location:75 → 142
      DSRM_STAU2_rpt1; first double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19882
      Location:170 → 251
      DSRM_STAU2_rpt2; second double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19884
      Location:278 → 344
      DSRM_STAU2_rpt3; third double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19886
      Location:376 → 461
      DSRM_STAU2_rpt4; fourth double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins

    2. XM_040677672.2 → XP_040533606.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XED3
      Related
      ENSGALP00010005050.1, ENSGALT00010008625.1
      Conserved Domains (5) summary
      pfam16482
      Location:528 → 633
      Staufen_C; Staufen C-terminal domain
      cd19880
      Location:75 → 142
      DSRM_STAU2_rpt1; first double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19882
      Location:170 → 251
      DSRM_STAU2_rpt2; second double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19884
      Location:278 → 344
      DSRM_STAU2_rpt3; third double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19886
      Location:376 → 461
      DSRM_STAU2_rpt4; fourth double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins

    3. XM_046919733.1 → XP_046775689.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X3

    4. XM_046919699.1 → XP_046775655.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X1

    5. XM_046919707.1 → XP_046775663.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X1

    6. XM_046919711.1 → XP_046775667.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X1

    7. XM_046919709.1 → XP_046775665.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X1

    8. XM_040677655.1 → XP_040533589.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XED3
      Conserved Domains (5) summary
      pfam16482
      Location:528 → 633
      Staufen_C; Staufen C-terminal domain
      cd19880
      Location:75 → 142
      DSRM_STAU2_rpt1; first double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19882
      Location:170 → 251
      DSRM_STAU2_rpt2; second double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19884
      Location:278 → 344
      DSRM_STAU2_rpt3; third double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19886
      Location:376 → 461
      DSRM_STAU2_rpt4; fourth double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins

    9. XM_040677681.2 → XP_040533615.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XED3
      Conserved Domains (5) summary
      pfam16482
      Location:528 → 633
      Staufen_C; Staufen C-terminal domain
      cd19880
      Location:75 → 142
      DSRM_STAU2_rpt1; first double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19882
      Location:170 → 251
      DSRM_STAU2_rpt2; second double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19884
      Location:278 → 344
      DSRM_STAU2_rpt3; third double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19886
      Location:376 → 461
      DSRM_STAU2_rpt4; fourth double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins

    10. XM_046919744.1 → XP_046775700.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X4

      Related
      ENSGALP00010005052.1, ENSGALT00010008629.1

    11. XM_040677690.2 → XP_040533624.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XJW6
      Related
      ENSGALP00010005049.1, ENSGALT00010008624.1
      Conserved Domains (5) summary
      pfam16482
      Location:528 → 620
      Staufen_C; Staufen C-terminal domain
      cd19880
      Location:75 → 142
      DSRM_STAU2_rpt1; first double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19882
      Location:170 → 251
      DSRM_STAU2_rpt2; second double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19884
      Location:278 → 344
      DSRM_STAU2_rpt3; third double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins
      cd19886
      Location:376 → 461
      DSRM_STAU2_rpt4; fourth double-stranded RNA binding motif of double-stranded RNA-binding protein Staufen homolog 2 (Staufen 2) and similar proteins

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      117513770..117680074 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046910619.1 → XP_046766575.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X3

    2. XM_046910611.1 → XP_046766567.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X1

    3. XM_046910620.1 → XP_046766576.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X3

    4. XM_046910614.1 → XP_046766570.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X1

    5. XM_046910615.1 → XP_046766571.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X1

    6. XM_046910617.1 → XP_046766573.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X1

    7. XM_046910616.1 → XP_046766572.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X1

    8. XM_046910612.1 → XP_046766568.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X1

    9. XM_046910613.1 → XP_046766569.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X1

    10. XM_046910621.1 → XP_046766577.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X4

    11. XM_046910618.1 → XP_046766574.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X2

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001030941.1: Suppressed sequence

      Description
      NM_001030941.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
    Nucleotide Protein Strain
    Heading Accession and Version

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