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    AMIGO2 adhesion molecule with Ig like domain 2 [ Gallus gallus (chicken) ]

    Gene ID: 417810, updated on 5-Mar-2024

    Summary

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    Symbol
    AMIGO2provided by CGNC
    Full Name
    adhesion molecule with Ig like domain 2provided by CGNC
    Primary source
    CGNC:7403
    See related
    Ensembl:ENSGALG00010014109
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (31391148..31400683, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (31727601..31737128, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 38 member 4 Neighboring gene uncharacterized LOC101749586 Neighboring gene uncharacterized LOC121107321 Neighboring gene uncharacterized LOC124417500 Neighboring gene uncharacterized LOC112533249 Neighboring gene RNA polymerase II associated protein 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An expressed sequence tag analysis of the chicken reproductive tract transcriptome. Froman DP, et al. Poult Sci, 2006 Aug. PMID 16903475

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in brain development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    amphoterin-induced protein 2
    Names
    amphoterin induced gene 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001199550.2 → NP_001186479.2  amphoterin-induced protein 2 precursor

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000012
      UniProtKB/TrEMBL
      A0A8V0YUJ7
      Related
      ENSGALP00010019932.1, ENSGALT00010033903.1
      Conserved Domains (3) summary
      smart00409
      Location:299 → 379
      IG; Immunoglobulin
      COG4886
      Location:53 → 237
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:69 → 94
      LRR_RI; leucine-rich repeat [structural motif]

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      31391148..31400683 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015281376.4 → XP_015136862.2  amphoterin-induced protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YUJ7
      Related
      ENSGALP00010019929.1, ENSGALT00010033893.1
      Conserved Domains (3) summary
      smart00409
      Location:299 → 379
      IG; Immunoglobulin
      COG4886
      Location:53 → 237
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:69 → 94
      LRR_RI; leucine-rich repeat [structural motif]

    2. XM_046937965.1 → XP_046793921.1  amphoterin-induced protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YUJ7

    3. XM_040695462.2 → XP_040551396.1  amphoterin-induced protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YUJ7
      Related
      ENSGALP00010019927.1, ENSGALT00010033889.1
      Conserved Domains (3) summary
      smart00409
      Location:299 → 379
      IG; Immunoglobulin
      COG4886
      Location:53 → 237
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:69 → 94
      LRR_RI; leucine-rich repeat [structural motif]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      31727601..31737128 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046907225.1 → XP_046763181.1  amphoterin-induced protein 2 isoform X1

    2. XM_046907227.1 → XP_046763183.1  amphoterin-induced protein 2 isoform X1

    3. XM_046907226.1 → XP_046763182.1  amphoterin-induced protein 2 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

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