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    CTNNA1 catenin alpha 1 [ Gallus gallus (chicken) ]

    Gene ID: 416184, updated on 5-Mar-2024

    Summary

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    Official Symbol
    CTNNA1provided by CGNC
    Official Full Name
    catenin alpha 1provided by CGNC
    Primary source
    CGNC:1748
    See related
    Ensembl:ENSGALG00010008385
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 13
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 13 NC_052544.1 (2230789..2338940, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 13 NC_052585.1 (2240968..2349138, complement)

    Chromosome 13 - NC_052544.1Genomic Context describing neighboring genes Neighboring gene matrin 3 Neighboring gene uncharacterized LOC416186 Neighboring gene SIL1 nucleotide exchange factor Neighboring gene leucine rich repeat transmembrane neuronal 2 Neighboring gene uncharacterized LOC121106721 Neighboring gene small nucleolar RNA SNORD63 Neighboring gene uncharacterized LOC121106722 Neighboring gene heat shock protein family A (Hsp70) member 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables beta-catenin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cadherin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural molecule activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of catenin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    catenin alpha-1
    Names
    catenin (cadherin-associated protein), alpha 1, 102kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      2230789..2338940 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_414513.8 → XP_414513.1  catenin alpha-1

      UniProtKB/TrEMBL
      A0A8V0XTR4
      Related
      ENSGALP00010011614.1, ENSGALT00010020065.1
      Conserved Domains (1) summary
      pfam01044
      Location:82 → 866
      Vinculin; Vinculin family

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      2240968..2349138 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040682856.2 → XP_040538790.1  catenin alpha-1

      UniProtKB/TrEMBL
      A0A8V0XTR4
      Conserved Domains (1) summary
      pfam01044
      Location:82 → 866
      Vinculin; Vinculin family
    Nucleotide Protein Strain
    Heading Accession and Version

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