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    acbd4 acyl-CoA binding domain containing 4 [ Danio rerio (zebrafish) ]

    Gene ID: 406368, updated on 27-Mar-2024

    Summary

    Official Symbol
    acbd4provided by ZNC
    Official Full Name
    acyl-CoA binding domain containing 4provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-2074
    See related
    Ensembl:ENSDARG00000027070 AllianceGenome:ZFIN:ZDB-GENE-040426-2074
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:85611
    Summary
    Predicted to enable fatty-acyl-CoA binding activity. Is expressed in myoseptum and myotome. Orthologous to human ACBD4 (acyl-CoA binding domain containing 4). [provided by Alliance of Genome Resources, Apr 2022]
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
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    Genomic context

    Location:
    chromosome: 12
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (15568761..15584479, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (15526454..15542172, complement)

    Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 23b Neighboring gene HEXIM P-TEFb complex subunit 1 Neighboring gene phospholipase C, delta 3b Neighboring gene N-myristoyltransferase 1b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables fatty-acyl-CoA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables fatty-acyl-CoA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    involved_in fatty acid metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    acyl-CoA-binding domain-containing protein 4

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_213095.1NP_998260.1  acyl-CoA-binding domain-containing protein 4

      See identical proteins and their annotated locations for NP_998260.1

      Status: PROVISIONAL

      Source sequence(s)
      BC068326
      UniProtKB/TrEMBL
      Q6NV40
      Related
      ENSDARP00000124736.1, ENSDART00000150134.3
      Conserved Domains (1) summary
      pfam00887
      Location:1396
      ACBP; Acyl CoA binding protein

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007123.7 Reference GRCz11 Primary Assembly

      Range
      15568761..15584479 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)