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    SLCO1B3 solute carrier organic anion transporter family member 1B3 [ Bos taurus (cattle) ]

    Gene ID: 404160, updated on 16-Jan-2024

    Summary

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    Gene symbol
    SLCO1B3
    Gene description
    solute carrier organic anion transporter family member 1B3
    See related
    BGD:BT22011; Ensembl:ENSBTAG00000022329
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    SLCO1B4; Slc21a10
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    Genomic context

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    See SLCO1B3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (88900973..88973164, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene RecQ like helicase Neighboring gene pyridine nucleotide-disulphide oxidoreductase domain 1 Neighboring gene solute carrier organic anion transporter family member 1A2 Neighboring gene islet amyloid polypeptide Neighboring gene heme-binding protein 1 Neighboring gene U6 spliceosomal RNA Neighboring gene solute carrier organic anion transporter family member 1C1 Neighboring gene phosphodiesterase 3A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sodium-independent organic anion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sodium-independent organic anion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    solute carrier organic anion transporter family member 1B3
    Names
    organic anion transporting polypeptide 1b4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_205804.2 → NP_991373.1  solute carrier organic anion transporter family member 1B3

      See identical proteins and their annotated locations for NP_991373.1

      Status: PROVISIONAL

      Source sequence(s)
      AJ508747
      UniProtKB/TrEMBL
      A0A3Q1LW09, Q8HYW1
      Related
      ENSBTAP00000059552.2, ENSBTAT00000068947.2
      Conserved Domains (3) summary
      cd06174
      Location:33 → 445
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      cd01330
      Location:458 → 511
      KAZAL_SLC21; The kazal-type serine protease inhibitor domain has been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The KAZAL_SLC21 domain is a ...
      pfam03137
      Location:31 → 621
      OATP; Organic Anion Transporter Polypeptide (OATP) family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      88900973..88973164 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005206931.5 → XP_005206988.1  solute carrier organic anion transporter family member 1B3 isoform X1

      See identical proteins and their annotated locations for XP_005206988.1

      UniProtKB/TrEMBL
      A0A3Q1LW09, F1MYV0
      Conserved Domains (3) summary
      cd06174
      Location:33 → 445
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      cd01330
      Location:458 → 511
      KAZAL_SLC21; The kazal-type serine protease inhibitor domain has been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The KAZAL_SLC21 domain is a ...
      pfam03137
      Location:31 → 621
      OATP; Organic Anion Transporter Polypeptide (OATP) family
    Nucleotide Protein Strain
    Heading Accession and Version

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